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BRAF抑制剂研发历程中的挑战与机遇:2002年至2022年

Challenges and Opportunities in the Crusade of BRAF Inhibitors: From 2002 to 2022.

作者信息

Singh Ankit Kumar, Sonawane Pankaj, Kumar Adarsh, Singh Harshwardhan, Naumovich Vladislav, Pathak Prateek, Grishina Maria, Khalilullah Habibullah, Jaremko Mariusz, Emwas Abdul-Hamid, Verma Amita, Kumar Pradeep

机构信息

Department of Pharmaceutical Sciences and Natural Products, Central University of Punjab, Ghudda, Bathinda 151401, India.

Laboratory of Computational Modeling of Drugs, Higher Medical and Biological School, South Ural State University, Chelyabinsk 454008, Russia.

出版信息

ACS Omega. 2023 Jul 26;8(31):27819-27844. doi: 10.1021/acsomega.3c00332. eCollection 2023 Aug 8.


DOI:10.1021/acsomega.3c00332
PMID:37576670
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10413849/
Abstract

Serine/threonine-protein kinase B-Raf (BRAF; RAF = rapidly accelerated fibrosarcoma) plays an important role in the mitogen-activated protein kinase (MAPK) signaling cascade. Somatic mutations in the BRAF gene were first discovered in 2002 by Davies et al., which was a major breakthrough in cancer research. Subsequently, three different classes of BRAF mutants have been discovered. This class includes class I monomeric mutants (BRAF), class II BRAF homodimer mutants (non-V600), and class III BRAF heterodimers (non-V600). Cancers caused by these include melanoma, thyroid cancer, ovarian cancer, colorectal cancer, nonsmall cell lung cancer, and others. In this study, we have highlighted the major binding pockets in BRAF protein, their active and inactive conformations with inhibitors, and BRAF dimerization and its importance in paradoxical activation and BRAF mutation. We have discussed the first-, second-, and third-generation drugs approved by the Food and Drug Administration and drugs under clinical trials with all four different binding approaches with DFG-IN/OUT and αC-IN/OUT for BRAF protein. We have investigated particular aspects and difficulties with all three generations of inhibitors. Finally, this study has also covered recent developments in synthetic BRAF inhibitors (from their discovery in 2002 to 2022), their unique properties, and importance in inhibiting BRAF mutants.

摘要

丝氨酸/苏氨酸蛋白激酶B-Raf(BRAF;RAF=快速进展性纤维肉瘤)在丝裂原活化蛋白激酶(MAPK)信号级联反应中起重要作用。2002年,戴维斯等人首次发现BRAF基因的体细胞突变,这是癌症研究中的一项重大突破。随后,人们发现了三类不同的BRAF突变体。这一类包括I类单体突变体(BRAF)、II类BRAF同二聚体突变体(非V600)和III类BRAF异二聚体(非V600)。由这些突变导致的癌症包括黑色素瘤、甲状腺癌、卵巢癌、结直肠癌、非小细胞肺癌等。在本研究中,我们重点介绍了BRAF蛋白中的主要结合口袋、它们与抑制剂的活性和非活性构象,以及BRAF二聚化及其在反常激活和BRAF突变中的重要性。我们讨论了美国食品药品监督管理局批准的第一代、第二代和第三代药物,以及针对BRAF蛋白采用DFG-IN/OUT和αC-IN/OUT这四种不同结合方式进行临床试验的药物。我们研究了三代抑制剂各自的特殊方面和难点。最后,本研究还涵盖了合成BRAF抑制剂的最新进展(从2002年发现到2022年)、它们的独特性质以及在抑制BRAF突变体中的重要性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69f9/10413849/1fca6c51a7e8/ao3c00332_0010.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69f9/10413849/c63bcd2533c0/ao3c00332_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69f9/10413849/22e5e9fdd44a/ao3c00332_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69f9/10413849/81de7d335e14/ao3c00332_0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/69f9/10413849/0d9ec13c8512/ao3c00332_0008.jpg
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[4]
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[5]
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[6]
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[7]
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[8]
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本文引用的文献

[1]
Gaussian field-based 3D-QSAR and molecular simulation studies to design potent pyrimidine-sulfonamide hybrids as selective BRAF inhibitors.

RSC Adv. 2022-10-21

[2]
Mechanism and inhibition of BRAF kinase.

Curr Opin Chem Biol. 2022-12

[3]
Estimated sensitivity profiles of lung cancer specific uncommon BRAF mutants towards experimental and clinically approved kinase inhibitors.

Toxicol Appl Pharmacol. 2022-10-15

[4]
Current Insights into the Role of BRAF Inhibitors in Treatment of Melanoma.

Anticancer Agents Med Chem. 2023

[5]
Phase I Targeted Combination Trial of Sorafenib and GW5074 in Patients with Advanced Refractory Solid Tumors.

J Clin Med. 2022-4-14

[6]
Structural insights into the BRAF monomer-to-dimer transition mediated by RAS binding.

Nat Commun. 2022-1-25

[7]
A Structure is Worth a Thousand Words: New Insights for RAS and RAF Regulation.

Cancer Discov. 2022-4-1

[8]
Structural optimization of 4-(imidazol-5-yl)pyridine derivatives affords broad-spectrum anticancer agents with selective B-RAF/p38α kinase inhibitory activity: Synthesis, in vitro assays and in silico study.

Eur J Pharm Sci. 2022-4-1

[9]
High-throughput ex vivo drug testing identifies potential drugs and drug combinations for NRAS-positive malignant melanoma.

Transl Oncol. 2022-1

[10]
Lung Cancer Driven by BRAF Mutation Is Targetable by EGFR Kinase Inhibitors.

J Thorac Oncol. 2022-2

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