Identification of aqueous access residues of the sodium half channel in transmembrane helix 5 of the F- subunit of ATP synthase.

The F- subunit of the Na-transporting FF ATP synthase from plays a key role in Na transport. It forms half channels that allow Na to enter and leave the buried carboxyl group on F- subunits. The essential Arg residue R226, which faces the carboxyl group of F- subunits in the middle of transmembrane helix 5 of the F- subunit, separates the cytoplasmic side and periplasmic half-channels. To elucidate contributions of other amino acid residues of transmembrane helix 5 using hybrid FF (F from and F from thermophilic PS3), 25 residues were individually mutated to Cys, and effects of modification with the SH-modifying agent N-ethylmaleimide (NEM) on ATP synthesis and hydrolysis activity were analyzed. NEM significantly inhibited ATP synthesis and hydrolysis as well as proton pumping activities of A214C, G215C, A218C, I223C (cytoplasmic side from R226), and N230C (periplasmic side from R226) mutants and inhibited ATP synthesis activity of the K219C mutant (cytoplasmic side from R226). Thus, these residues contribute to the integrity of the Na half channel, and both half channels are present in the F- subunit.