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印度佛手瓜(Sechium edule (Jacq.) Sw.)种质形态和分子多样性的比较评估。

A comparative assessment of morphological and molecular diversity among Sechium edule (Jacq.) Sw. accessions in India.

作者信息

Jain Jyothi Ramesh, Timsina Bibechana, Satyan Kumudini Belur, Manohar Shiragambi Hanumantagouda

机构信息

Department of Biotechnology, Centre of Post Graduate Studies, Jain University, Jayanagar, Bangalore, 560011, India.

出版信息

3 Biotech. 2017 Jun;7(2):106. doi: 10.1007/s13205-017-0726-5. Epub 2017 May 30.

Abstract

Genetic variation of 36 Sechium edule accessions collected across 12 states in India was assessed using morphological traits and DAMD markers. Eighteen fruit morphological traits (both qualitative and quantitative) were evaluated to confirm the variations in the present collection. Quantitative traits showed major variations with respect to fruit weight (7.85-498.33 g/fruit), fruit length (5.8-15 cm/fruit), fruit diameter (6-28 cm/fruit) and length of the spine (0-5 cm). Qualitative traits were also diverse in fruit colour, shape, spine density, reticulation, flexibility of spine and furrow depth. The first six principle components showed 82.88% variation in the principal component analysis. The principal component analysis revealed that fruit weight, fruit width, fruit diameter, fruit shape, length of spine, spine density and furrow depth had a significant contribution to the total variation. The DNA analysis performed using DAMD primers were used for deducing the diversity at DNA level. The collection produced 102 bands out of which 97 were polymorphic and the percentage polymorphism ranged between 66.66 and 100 per primer. Discrete pattern of clustering was obtained using UPGMA method of complete linkage percent disagreement revealing high diversity among the collected accessions. Thus, the present study indicates that molecular and morphological marker map would improve our knowledge of S. edule and would facilitate efforts to breed improved S. edule cultivars.

摘要

利用形态性状和DAMD标记对从印度12个邦收集的36份佛手瓜种质的遗传变异进行了评估。对18个果实形态性状(包括定性和定量性状)进行了评价,以确认当前收集种质中的变异情况。定量性状在果实重量(7.85 - 498.33克/果实)、果实长度(5.8 - 15厘米/果实)、果实直径(6 - 28厘米/果实)和刺长(0 - 5厘米)方面表现出较大变异。定性性状在果实颜色、形状、刺密度、网纹、刺的柔韧性和沟深度方面也存在差异。在前六个主成分中,主成分分析显示变异率为82.88%。主成分分析表明,果实重量、果实宽度、果实直径、果实形状、刺长、刺密度和沟深度对总变异有显著贡献。使用DAMD引物进行的DNA分析用于推断DNA水平上的多样性。该收集种质共产生102条带,其中97条为多态性带,每个引物的多态性百分比在66.66%至100%之间。使用完全连锁百分比不一致的UPGMA方法获得了离散的聚类模式,表明所收集的种质之间存在高度多样性。因此,本研究表明,分子和形态标记图谱将提高我们对佛手瓜的认识,并有助于培育改良的佛手瓜品种。

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