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用于晚期鼻咽癌预后生物标志物的放射组学机器学习分类器。

Radiomic machine-learning classifiers for prognostic biomarkers of advanced nasopharyngeal carcinoma.

作者信息

Zhang Bin, He Xin, Ouyang Fusheng, Gu Dongsheng, Dong Yuhao, Zhang Lu, Mo Xiaokai, Huang Wenhui, Tian Jie, Zhang Shuixing

机构信息

Medical Imaging Center, First Affiliated Hospital of Jinan University, Guangzhou, Guangdong, PR China; Institute of Molecular and Functional Imaging, Jinan University, Guangzhou, Guangdong, PR China.

Department of Mathematics, City University of Hong Kong, PR China.

出版信息

Cancer Lett. 2017 Sep 10;403:21-27. doi: 10.1016/j.canlet.2017.06.004. Epub 2017 Jun 10.

Abstract

We aimed to identify optimal machine-learning methods for radiomics-based prediction of local failure and distant failure in advanced nasopharyngeal carcinoma (NPC). We enrolled 110 patients with advanced NPC. A total of 970 radiomic features were extracted from MRI images for each patient. Six feature selection methods and nine classification methods were evaluated in terms of their performance. We applied the 10-fold cross-validation as the criterion for feature selection and classification. We repeated each combination for 50 times to obtain the mean area under the curve (AUC) and test error. We observed that the combination methods Random Forest (RF) + RF (AUC, 0.8464 ± 0.0069; test error, 0.3135 ± 0.0088) had the highest prognostic performance, followed by RF + Adaptive Boosting (AdaBoost) (AUC, 0.8204 ± 0.0095; test error, 0.3384 ± 0.0097), and Sure Independence Screening (SIS) + Linear Support Vector Machines (LSVM) (AUC, 0.7883 ± 0.0096; test error, 0.3985 ± 0.0100). Our radiomics study identified optimal machine-learning methods for the radiomics-based prediction of local failure and distant failure in advanced NPC, which could enhance the applications of radiomics in precision oncology and clinical practice.

摘要

我们旨在确定基于影像组学预测晚期鼻咽癌(NPC)局部复发和远处转移的最佳机器学习方法。我们纳入了110例晚期NPC患者。为每位患者从MRI图像中提取了总共970个影像组学特征。从性能方面评估了六种特征选择方法和九种分类方法。我们将10倍交叉验证作为特征选择和分类的标准。我们将每种组合重复50次以获得曲线下平均面积(AUC)和测试误差。我们观察到组合方法随机森林(RF)+ RF(AUC,0.8464±0.0069;测试误差,0.3135±0.0088)具有最高的预后性能,其次是RF +自适应增强(AdaBoost)(AUC,0.8204±0.0095;测试误差,0.3384±0.0097),以及确信独立筛选(SIS)+线性支持向量机(LSVM)(AUC,0.7883±0.0096;测试误差,0.3985±0.0100)。我们的影像组学研究确定了基于影像组学预测晚期NPC局部复发和远处转移的最佳机器学习方法,这可以增强影像组学在精准肿瘤学和临床实践中的应用。

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