• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过机器学习预测有机反应的结果:当前的描述符是否足够?

Predicting the outcomes of organic reactions via machine learning: are current descriptors sufficient?

机构信息

Faculty of Mathematics, Informatics, and Mechanics, University of Warsaw, 02-097, Warsaw, Poland.

DARPA Make-It Program & the Institute of Organic Chemistry, Polish Academy of Sciences, Warsaw, Poland.

出版信息

Sci Rep. 2017 Jun 15;7(1):3582. doi: 10.1038/s41598-017-02303-0.

DOI:10.1038/s41598-017-02303-0
PMID:28620199
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5472585/
Abstract

As machine learning/artificial intelligence algorithms are defeating chess masters and, most recently, GO champions, there is interest - and hope - that they will prove equally useful in assisting chemists in predicting outcomes of organic reactions. This paper demonstrates, however, that the applicability of machine learning to the problems of chemical reactivity over diverse types of chemistries remains limited - in particular, with the currently available chemical descriptors, fundamental mathematical theorems impose upper bounds on the accuracy with which raction yields and times can be predicted. Improving the performance of machine-learning methods calls for the development of fundamentally new chemical descriptors.

摘要

随着机器学习/人工智能算法在击败国际象棋大师之后,最近又在击败围棋冠军,人们开始产生兴趣并希望这些算法在帮助化学家预测有机反应结果方面同样有用。然而,本文表明,机器学习在不同类型化学中的化学反应性问题上的适用性仍然有限 - 特别是,目前可用的化学描述符,基本数学定理对反应产率和时间的预测精度施加了上限。要提高机器学习方法的性能,需要开发全新的化学描述符。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/604a/5472585/158a2b2abaa3/41598_2017_2303_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/604a/5472585/afa271c6683b/41598_2017_2303_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/604a/5472585/08828bdd5e63/41598_2017_2303_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/604a/5472585/87a3f1752a45/41598_2017_2303_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/604a/5472585/51e36f25ea47/41598_2017_2303_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/604a/5472585/c558456271f4/41598_2017_2303_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/604a/5472585/158a2b2abaa3/41598_2017_2303_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/604a/5472585/afa271c6683b/41598_2017_2303_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/604a/5472585/08828bdd5e63/41598_2017_2303_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/604a/5472585/87a3f1752a45/41598_2017_2303_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/604a/5472585/51e36f25ea47/41598_2017_2303_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/604a/5472585/c558456271f4/41598_2017_2303_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/604a/5472585/158a2b2abaa3/41598_2017_2303_Fig6_HTML.jpg

相似文献

1
Predicting the outcomes of organic reactions via machine learning: are current descriptors sufficient?通过机器学习预测有机反应的结果:当前的描述符是否足够?
Sci Rep. 2017 Jun 15;7(1):3582. doi: 10.1038/s41598-017-02303-0.
2
Prediction of acetylcholinesterase inhibitors and characterization of correlative molecular descriptors by machine learning methods.通过机器学习方法预测乙酰胆碱酯酶抑制剂并对相关分子描述符进行特征化。
Eur J Med Chem. 2010 Mar;45(3):1167-72. doi: 10.1016/j.ejmech.2009.12.038. Epub 2009 Dec 28.
3
Prediction of chemical carcinogenicity by machine learning approaches.通过机器学习方法预测化学致癌性。
SAR QSAR Environ Res. 2009;20(1-2):27-75. doi: 10.1080/10629360902724085.
4
Machine Learning Using Combined Structural and Chemical Descriptors for Prediction of Methane Adsorption Performance of Metal Organic Frameworks (MOFs).基于结构和化学描述符的机器学习在预测金属有机骨架(MOFs)甲烷吸附性能中的应用。
ACS Comb Sci. 2017 Oct 9;19(10):640-645. doi: 10.1021/acscombsci.7b00056. Epub 2017 Sep 5.
5
Kernel Methods for Predicting Yields of Chemical Reactions.核方法在化学反应产率预测中的应用。
J Chem Inf Model. 2022 May 9;62(9):2077-2092. doi: 10.1021/acs.jcim.1c00699. Epub 2021 Oct 26.
6
Expert system for predicting reaction conditions: the Michael reaction case.反应条件预测专家系统:迈克尔反应案例
J Chem Inf Model. 2015 Feb 23;55(2):239-50. doi: 10.1021/ci500698a. Epub 2015 Feb 3.
7
Predicting the Skin Sensitization Potential of Small Molecules with Machine Learning Models Trained on Biologically Meaningful Descriptors.利用基于具有生物学意义描述符训练的机器学习模型预测小分子的皮肤致敏潜力。
Pharmaceuticals (Basel). 2021 Aug 11;14(8):790. doi: 10.3390/ph14080790.
8
Comparison of combinatorial clustering methods on pharmacological data sets represented by machine learning-selected real molecular descriptors.基于机器学习筛选的真实分子描述符的药理学数据集的组合聚类方法比较。
J Chem Inf Model. 2011 Dec 27;51(12):3036-49. doi: 10.1021/ci2000083. Epub 2011 Dec 9.
9
ReactionPredictor: prediction of complex chemical reactions at the mechanistic level using machine learning.ReactionPredictor:使用机器学习在机理水平上预测复杂化学反应。
J Chem Inf Model. 2012 Oct 22;52(10):2526-40. doi: 10.1021/ci3003039. Epub 2012 Oct 1.
10
A general reinforcement learning algorithm that masters chess, shogi, and Go through self-play.一种通过自我对弈掌握国际象棋、将棋和围棋的通用强化学习算法。
Science. 2018 Dec 7;362(6419):1140-1144. doi: 10.1126/science.aar6404.

引用本文的文献

1
Predicting reaction conditions: a data-driven perspective.预测反应条件:数据驱动的视角
Chem Sci. 2025 Aug 6. doi: 10.1039/d5sc03045e.
2
Predicting and Explaining Yields with Machine Learning for Carboxylated Azoles and Beyond.利用机器学习预测和解释羧基化唑类及其他物质的产率
J Chem Inf Model. 2025 Feb 24;65(4):1862-1872. doi: 10.1021/acs.jcim.4c02336. Epub 2025 Feb 7.
3
Advancing 2D material predictions: superior work function estimation with atomistic line graph neural networks.推进二维材料预测:使用原子线图神经网络进行卓越的功函数估计。

本文引用的文献

1
Neural Networks for the Prediction of Organic Chemistry Reactions.用于预测有机化学反应的神经网络。
ACS Cent Sci. 2016 Oct 26;2(10):725-732. doi: 10.1021/acscentsci.6b00219. Epub 2016 Oct 14.
2
Machine-learning-assisted materials discovery using failed experiments.基于失败实验的机器学习辅助材料发现。
Nature. 2016 May 5;533(7601):73-6. doi: 10.1038/nature17439.
3
Computer-Assisted Synthetic Planning: The End of the Beginning.计算机辅助综合规划:开端的终结。
RSC Adv. 2024 Nov 29;14(51):38070-38078. doi: 10.1039/d4ra07703b. eCollection 2024 Nov 25.
4
When Yield Prediction Does Not Yield Prediction: An Overview of the Current Challenges.当产量预测无法预测时:当前挑战概述。
J Chem Inf Model. 2024 Jan 8;64(1):42-56. doi: 10.1021/acs.jcim.3c01524. Epub 2023 Dec 20.
5
Integrating QSAR modelling and deep learning in drug discovery: the emergence of deep QSAR.将 QSAR 建模与深度学习整合到药物发现中:深 QSAR 的出现。
Nat Rev Drug Discov. 2024 Feb;23(2):141-155. doi: 10.1038/s41573-023-00832-0. Epub 2023 Dec 8.
6
A deep learning framework for accurate reaction prediction and its application on high-throughput experimentation data.一种用于精确反应预测的深度学习框架及其在高通量实验数据上的应用。
J Cheminform. 2023 Aug 11;15(1):72. doi: 10.1186/s13321-023-00732-w.
7
On the use of real-world datasets for reaction yield prediction.关于使用真实世界数据集进行反应产率预测
Chem Sci. 2023 Mar 13;14(19):4997-5005. doi: 10.1039/d2sc06041h. eCollection 2023 May 17.
8
Organic reactivity from mechanism to machine learning.从机理到机器学习的有机反应活性
Nat Rev Chem. 2021 Apr;5(4):240-255. doi: 10.1038/s41570-021-00260-x. Epub 2021 Mar 16.
9
Global reactivity models are impactful in industrial synthesis applications.全局反应性模型在工业合成应用中具有重要影响。
J Cheminform. 2023 Feb 11;15(1):20. doi: 10.1186/s13321-023-00685-0.
10
Machine Learning C-N Couplings: Obstacles for a General-Purpose Reaction Yield Prediction.机器学习中的C-N偶联:通用反应产率预测的障碍
ACS Omega. 2023 Jan 11;8(3):3017-3025. doi: 10.1021/acsomega.2c05546. eCollection 2023 Jan 24.
Angew Chem Int Ed Engl. 2016 May 10;55(20):5904-37. doi: 10.1002/anie.201506101. Epub 2016 Apr 8.
4
A Priori Estimation of Organic Reaction Yields.有机反应产率的先验估计。
Angew Chem Int Ed Engl. 2015 Sep 7;54(37):10797-801. doi: 10.1002/anie.201503890. Epub 2015 Jul 21.
5
Economic reasoning and artificial intelligence.经济推理与人工智能。
Science. 2015 Jul 17;349(6245):267-72. doi: 10.1126/science.aaa8403. Epub 2015 Jul 16.
6
Machine learning: Trends, perspectives, and prospects.机器学习:趋势、观点和展望。
Science. 2015 Jul 17;349(6245):255-60. doi: 10.1126/science.aaa8415.
7
Development of a novel fingerprint for chemical reactions and its application to large-scale reaction classification and similarity.一种用于化学反应的新型指纹图谱的开发及其在大规模反应分类和相似性方面的应用。
J Chem Inf Model. 2015 Jan 26;55(1):39-53. doi: 10.1021/ci5006614. Epub 2015 Jan 13.
8
Organic chemistry as a language and the implications of chemical linguistics for structural and retrosynthetic analyses.有机化学作为一种语言,以及化学语言学对于结构和逆合成分析的意义。
Angew Chem Int Ed Engl. 2014 Jul 28;53(31):8108-12. doi: 10.1002/anie.201403708. Epub 2014 Jul 10.
9
Computer science: The learning machines.计算机科学:学习机器。
Nature. 2014 Jan 9;505(7482):146-8. doi: 10.1038/505146a.
10
Deep architectures and deep learning in chemoinformatics: the prediction of aqueous solubility for drug-like molecules.化学信息学中的深度架构和深度学习:药物样分子水溶解度的预测。
J Chem Inf Model. 2013 Jul 22;53(7):1563-75. doi: 10.1021/ci400187y. Epub 2013 Jul 2.