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基于气候、土壤、树木测量、遗传和种群特征对马丁内斯种群进行区分。

Discrimination of Martinez populations on the basis of climatic, edaphic, dendrometric, genetic and population traits.

作者信息

Dominguez-Guerrero Iliana Karina, Del Rocío Mariscal-Lucero Samantha, Hernández-Díaz José Ciro, Heinze Berthold, Prieto-Ruiz José Ángel, Wehenkel Christian

机构信息

Instituto de Silvicultura e Industria de la Madera, Universidad Juárez del Estado de Durango, Durango, Mexico.

Federal Research Centre for Forests, Natural Hazards and Landscape (BFW), Vienna, Austria.

出版信息

PeerJ. 2017 Jun 12;5:e3452. doi: 10.7717/peerj.3452. eCollection 2017.

Abstract

BACKGROUND

, which is endemic to Mexico, is currently listed as "Endangered" on the Red List. Chihuahua spruce is only found in the Sierra Madre Occidental (SMO), Mexico. About 42,600 individuals are distributed in forty populations. These populations are fragmented and can be classified into three geographically distinct clusters in the SMO. The total area covered by populations is less than 300 ha. A recent study suggested assisted migration as an alternative to the conservation of , taking into consideration the genetic structure and diversity of the populations and the predictions regarding the future climate of the habitat. However, detailed background information is required to enable development of plans for protecting and conserving species and for successful assisted migration. Thus, it is important to identify differences between populations in relation to environmental conditions. The genetic diversity of populations, which affect vigor, evolution and adaptability of the species, must also be considered. In this study, we examined 14 populations of . , with the overall aim of discriminating the populations and form clusters of this species.

METHODS

Each population was represented by one 50 × 50 m plot established in the center of its respective location. Climate, soil, dasometric, density variables and genetic and species diversities were assessed in these plots for further analyses. The putatively neutral and adaptive AFLP markers were used to calculate genetic diversity. Affinity Propagation (AP) clustering technique and -means clustering algorithm were used to classify the populations in the optimal number of clusters. Later stepwise binomial logistic regression was applied to test for significant differences in variables of the southern and northern populations. Spearman's correlation test was used to analyze the relationships among all variables studied.

RESULTS

The binomial logistic regression analysis revealed that seven climate variables, the geographical longitude and sand proportion in the soil separated the southern from northern populations. The northern populations grow in more arid and continental conditions and on soils with lower sand proportion. The mean genetic diversity using all AFLP studied of was significantly correlated with the mean temperature in the warmest month, where warmer temperatures are associated to larger genetic diversity. Genetic diversity of calculated with putatively adaptive AFLP was not statistically significantly correlated with any environmental factor.

DISCUSSION

Future reforestation programs should take into account that at least two different groups (the northern and southern cluster) of exist, as local adaptation takes place because of different environmental conditions.

摘要

背景

墨西哥特有的奇瓦瓦云杉目前在红色名录中被列为“濒危”物种。奇瓦瓦云杉仅分布于墨西哥的西马德雷山脉(SMO)。约42600株个体分布在40个种群中。这些种群呈碎片化分布,在西马德雷山脉可分为三个地理上不同的集群。奇瓦瓦云杉种群覆盖的总面积小于300公顷。最近的一项研究建议,考虑到种群的遗传结构和多样性以及栖息地未来气候的预测,辅助迁移可作为保护奇瓦瓦云杉的一种替代方法。然而,需要详细的背景信息来制定保护和保存物种的计划以及成功进行辅助迁移。因此,识别种群之间在环境条件方面的差异很重要。还必须考虑影响物种活力、进化和适应性的种群遗传多样性。在本研究中,我们调查了奇瓦瓦云杉的14个种群,总体目标是区分这些种群并形成该物种的集群。

方法

每个种群由在其各自位置中心建立的一个50×50米的样地代表。在这些样地中评估气候、土壤、测树学、密度变量以及遗传和物种多样性,以便进一步分析。使用假定中性和适应性的AFLP标记来计算遗传多样性。采用亲和传播(AP)聚类技术和K均值聚类算法将种群分类为最优数量的集群。随后应用逐步二项逻辑回归来检验奇瓦瓦云杉南北种群变量的显著差异。使用斯皮尔曼相关性检验来分析所研究的所有变量之间的关系。

结果

二项逻辑回归分析表明,七个气候变量、地理经度和土壤中的砂比例将南方种群与北方种群区分开来。北方种群生长在更干旱的大陆性条件下,且生长在砂比例较低的土壤上。使用所有研究的AFLP计算得出的奇瓦瓦云杉平均遗传多样性与最暖月的平均温度显著相关,温度越高,遗传多样性越大。用假定适应性AFLP计算的奇瓦瓦云杉遗传多样性与任何环境因子均无统计学显著相关性。

讨论

未来的造林计划应考虑到至少存在两个不同的奇瓦瓦云杉种群组(北方集群和南方集群),因为由于不同的环境条件会发生局部适应。

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