Suppr超能文献

基于溶液核磁共振(NMR)的分子生物学的最新进展。

Recent developments in solution nuclear magnetic resonance (NMR)-based molecular biology.

机构信息

Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, 240 Longwood Ave, Boston, MA, 02115, USA.

出版信息

J Mol Med (Berl). 2018 Jan;96(1):1-8. doi: 10.1007/s00109-017-1560-2. Epub 2017 Jun 23.

Abstract

Visualizing post-translational modifications, conformations, and interaction surfaces of protein structures at atomic resolution underpins the development of novel therapeutics to combat disease. As computational resources expand, in silico calculations coupled with experimentally derived structures and functional assays have led to an explosion in structure-based drug design (SBDD) with several compounds in clinical trials. It is increasingly clear that "hidden" transition-state structures along activation trajectories can be harnessed to develop novel classes of allosteric inhibitors. The goal of this mini-review is to empower the clinical researcher with a general knowledge of the strengths and weaknesses of nuclear magnetic resonance (NMR) spectroscopy in molecular medicine. Although NMR can determine protein structures at atomic resolution, its unrivaled strength lies in sensing subtle changes in a nuclei's chemical environment as a result of intrinsic conformational dynamics, solution conditions, and binding interactions. These can be recorded at atomic resolution, without explicit structure determination, and then incorporated with static structures or molecular dynamics simulations to produce a complete biological picture.

摘要

在原子分辨率下可视化蛋白质结构的翻译后修饰、构象和相互作用表面,是开发新型治疗药物以对抗疾病的基础。随着计算资源的扩展,计算与实验衍生的结构和功能测定相结合,导致基于结构的药物设计(SBDD)呈爆炸式增长,有几种化合物正在临床试验中。越来越明显的是,可以利用“隐藏”的激活轨迹中的过渡态结构来开发新型变构抑制剂。本综述的目的是使临床研究人员对磁共振(NMR)光谱在分子医学中的优势和局限性有一个总体的了解。尽管 NMR 可以在原子分辨率下确定蛋白质结构,但它无与伦比的优势在于能够感应由于固有构象动力学、溶液条件和结合相互作用而导致核化学环境的细微变化。这些可以在没有明确结构确定的情况下以原子分辨率记录下来,然后与静态结构或分子动力学模拟相结合,以产生完整的生物学图像。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fea8/5742078/b153532ae1c5/nihms901027f1.jpg

相似文献

8
Biomolecular NMR Spectroscopy?生物核磁共振波谱学
Int J Mol Sci. 2019 Mar 14;20(6):1278. doi: 10.3390/ijms20061278.

引用本文的文献

7
Metabolomics and NMR.代谢组学与核磁共振
Handb Exp Pharmacol. 2023;277:73-116. doi: 10.1007/164_2022_616.
10
Native Mass Spectrometry of Membrane Proteins.膜蛋白的原生质谱分析
Anal Chem. 2021 Jan 12;93(1):583-597. doi: 10.1021/acs.analchem.0c04342. Epub 2020 Oct 28.

本文引用的文献

10
Simultaneous prediction of protein folding and docking at high resolution.高分辨率下蛋白质折叠和对接的同步预测。
Proc Natl Acad Sci U S A. 2009 Nov 10;106(45):18978-83. doi: 10.1073/pnas.0904407106. Epub 2009 Oct 28.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验