Han Z G, Wu H, Liang C Y, Gao K, Mai H X, Cai Y S, Xu H F
Department of Operational Control, Guangzhou Center for Disease Control and Prevention, Guangzhou 510440, China.
Department of AIDS Control and Prevention, Guangzhou Center for Disease Control and Prevention, Guangzhou 510440, China.
Zhonghua Liu Xing Bing Xue Za Zhi. 2017 Jun 10;38(6):805-809. doi: 10.3760/cma.j.issn.0254-6450.2017.06.023.
To understand the characteristic of subtype distribution among foreigners who were living with HIV-1, in Guangzhou. HIV-1 RNAs were extracted from 114 serum specimens in foreigners diagnosed with HIV-1 infections between 2008 and 2010, and in 2015. Partial gene of HIV-1 genome from these RNA samples were amplified by nested reverse transcription polymerase chain reaction (nested-PCR) with nucleotide sequenced. Subsequently, phylogenetic tree was reconstructed using the sequences of samples and references. Among all the 114 samples, 57.9 were from males and 42.1 from females, with an average age as 35.21 years old and the standard deviation as 9.63 years. A total of 6.8 of the samples were from Africans. The top three subtypes were identified as CRF02_AG, subtype G and subtype C, accounted for 30.7, 14.9 and 12.3 respectively. Compared with samples gathered from 2008 to 2010, the proportions of subtype A1 and CRF01_AE significantly increased, while the other subtypes significantly decreased in 2015 ((2)=37.570; =0.013, 99: 0.010-0.016). Proportions of CRF01_AE and subtype G among males outnumbered the females but the proportions of subtype A1, CRF02_AG and URF among females appeared the other way round ((2)=15.528; =0.029, 99: 0.024-0.033). Proportions of CRF02_AG and subtype G among HIV-1 positive Africans were larger than those from other Southeast Asian countries or areas, However, the proportion of CRF01_AE among HIV-1 positive patients from Southeast Asian countries was higher than those patients from other areas ((2)=39.399; =0.009, 99: 0.006-0.011). The rates of resistance to any drug of protease inhibitors (PIs), reverse transcriptase inhibitors (RTIs), as well as to PIs, NRTIs, and NNRTIs alone, were 21.9, 12.3, 6.1 and 7.0, respectively. One of nine CRF01_AEs from the HIV-1 positive patients were found closely clustered in those phylogenetic tree (bootstrap=0.855) samples, collected from local patients in Guangzhou. Our findings showed that these foreign subtypes had been spread to the natives, more from the Africans than from the other areas, in Guangzhou. These types of viruses were different from the strains identified locally, suggesting that they might have been brought in by foreigners living with HIV-1, in Guangzhou. Programs related to care, support and behavioral intervention for HIV positive foreigners living in Guangzhou, should be strengthened.
为了解广州市HIV-1感染者中外国人的亚型分布特征,从2008年至2010年以及2015年诊断为HIV-1感染的外国人的114份血清标本中提取HIV-1 RNA。采用巢式逆转录聚合酶链反应(巢式PCR)扩增这些RNA样本中HIV-1基因组的部分基因并进行核苷酸测序。随后,利用样本和参考序列重建系统发育树。在所有114份样本中,57.9%来自男性,42.1%来自女性,平均年龄为35.21岁,标准差为9.63岁。共有6.8%的样本来自非洲人。前三大亚型被鉴定为CRF02_AG、G亚型和C亚型,分别占30.7%、14.9%和12.3%。与2008年至2010年收集的样本相比,2015年A1亚型和CRF01_AE亚型的比例显著增加,而其他亚型显著下降((χ²)=37.570;P=0.013,99%:0.010 - 0.016)。男性中CRF01_AE和G亚型的比例高于女性,但A1亚型、CRF02_AG和URF在女性中的比例情况则相反((χ²)=15.528;P=0.029,99%:0.024 - 0.033)。HIV-1阳性非洲人中CRF02_AG和G亚型的比例高于其他东南亚国家或地区,然而,东南亚国家HIV-1阳性患者中CRF01_AE的比例高于其他地区的患者((χ²)=39.399;P=0.009,99%:0.006 - 0.011)。蛋白酶抑制剂(PIs)、逆转录酶抑制剂(RTIs)以及单独对PIs、核苷类逆转录酶抑制剂(NRTIs)和非核苷类逆转录酶抑制剂(NNRTIs)的耐药率分别为21.9%、12.3%、6.1%和7.0%。在HIV-1阳性患者的9份CRF01_AE中,有1份在系统发育树(自展值=0.855)中与从广州本地患者收集的样本紧密聚类。我们的研究结果表明,这些外国亚型已传播到本地居民,在广州,更多是从非洲人传播而来,而非其他地区。这些病毒类型与本地鉴定的毒株不同,表明它们可能是由广州市的HIV-1感染者带入的。应加强针对广州市HIV阳性外国人的护理、支持和行为干预相关项目。