Seberg Hannah E, Van Otterloo Eric, Cornell Robert A
Interdisciplinary Graduate Program in Genetics, University of Iowa, Iowa City, IA, USA.
SDM-Craniofacial Biology, University of Colorado - Anschutz Medical Campus, Aurora, CO, USA.
Pigment Cell Melanoma Res. 2017 Sep;30(5):454-466. doi: 10.1111/pcmr.12611.
MITF governs multiple steps in the development of melanocytes, including specification from neural crest, growth, survival, and terminal differentiation. In addition, the level of MITF activity determines the phenotype adopted by melanoma cells, whether invasive, proliferative, or differentiated. However, MITF does not act alone. Here, we review literature on the transcription factors that co-regulate MITF-dependent genes. ChIP-seq studies have indicated that the transcription factors SOX10, YY1, and TFAP2A co-occupy subsets of regulatory elements bound by MITF in melanocytes. Analyses at single loci also support roles for LEF1, RB1, IRF4, and PAX3 acting in combination with MITF, while sequence motif analyses suggest that additional transcription factors colocalize with MITF at many melanocyte-specific regulatory elements. However, the precise biochemical functions of each of these MITF collaborators and their contributions to gene expression remain to be elucidated. Analogous to the transcriptional networks in morphogen-patterned tissues during embryogenesis, we anticipate that the level of MITF activity is controlled not only by the concentration of activated MITF, but also by additional transcription factors that either quantitatively or qualitatively influence the expression of MITF-target genes.
小眼畸形相关转录因子(MITF)调控黑素细胞发育的多个步骤,包括从神经嵴细胞分化而来、生长、存活以及终末分化。此外,MITF的活性水平决定了黑色素瘤细胞所采用的表型,无论是侵袭性、增殖性还是分化性。然而,MITF并非单独发挥作用。在此,我们综述了关于共同调控MITF依赖基因的转录因子的文献。染色质免疫沉淀测序(ChIP-seq)研究表明,转录因子SOX10, YY1和TFAP2A共同占据黑素细胞中与MITF结合的调控元件子集。对单个基因座的分析也支持淋巴样增强因子1(LEF1)、视网膜母细胞瘤蛋白1(RB1)、干扰素调节因子4(IRF4)和配对盒蛋白3(PAX3)与MITF联合发挥作用,而序列基序分析表明,在许多黑素细胞特异性调控元件上,其他转录因子与MITF共定位。然而,这些与MITF协同作用的因子各自的确切生化功能及其对基因表达的贡献仍有待阐明。类似于胚胎发育过程中形态发生素模式化组织中的转录网络,我们预计MITF的活性水平不仅受活化的MITF浓度控制,还受其他转录因子的控制,这些转录因子会定量或定性地影响MITF靶基因的表达。