Li Haoyu, Taj Muhammad Kamran, Ji Xiuling, Zhang Qi, Lin Liangbing, Zhou Zhimei, Wei Yunlin
Faculty of Environmental Science and Engineering, Kunming University of Science and Technology, Kunming, RP China / Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming, RP China.
Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming, RP China.
Pak J Pharm Sci. 2017 May;30(3):689-696.
The present study was an effort to determine the bacterial diversity of soils in Mingyong Glacier located at the Meili Snow Mountains of southwestern China. Mingyong Glacier has different climatic zones within a very narrow area, and bacterial community diversity in this low temperature area remains largely unknown. In this study, soil samples were collected from four different climatic zones: M11A (dry warm valley), M14 (forest), M15 (grass land), and M16 (glacier zones). Phylogenetic analysis based on 16S rRNA gene V6 hypervariable region showed high bacterial abundance in the glacier. The number of Operational Taxonomic Units ranged from 2.24×10 to 5.56×10 in soil samples. Statistical analysis of 16S rRNA gene clone libraries results showed that bacterial diversity in zones M11A,M14 and M16 are higher than in zone M15. The bacterial community structures are clearly distinguishable, and phylogenetic analysis showed that the predominant phyla were Proteobacteria, Deinococcus-Thermus, Firmicutes, Actinobacteria, and Nitrospirae in Mingyong Glacier. Seventy-nine different orders from four zones have been isolated. Bacterial diversity and distribution of bacterial communities related to the anthropogenic perturbations in zone (M15) were confirmed by diversity index analysis, and the diversity index of other three zones was satisfactory through this analysis software. The results suggest that bacterial diversity and distribution analyses using bacterial 16S rRNA gene V6 hypervariable region were successful, and bacterial communities in this area not only had the same bacterial phyla compared to other glaciers but also had their own rare species.
本研究旨在确定中国西南部梅里雪山明永冰川土壤中的细菌多样性。明永冰川在非常狭窄的区域内具有不同的气候带,而该低温区域内的细菌群落多样性在很大程度上仍不为人知。在本研究中,从四个不同气候带采集了土壤样本:M11A(干暖河谷)、M14(森林)、M15(草地)和M16(冰川带)。基于16S rRNA基因V6高变区的系统发育分析表明,冰川中的细菌丰度很高。土壤样本中的可操作分类单元数量在2.24×10至5.56×10之间。对16S rRNA基因克隆文库结果的统计分析表明,M11A、M14和M16区的细菌多样性高于M15区。细菌群落结构明显可区分,系统发育分析表明,明永冰川中主要的门类为变形菌门、嗜热栖热放线菌门、厚壁菌门、放线菌门和硝化螺旋菌门。已从四个区域分离出79个不同的目。通过多样性指数分析证实了与区域(M15)人为扰动相关的细菌群落的细菌多样性和分布,通过该分析软件,其他三个区域的多样性指数令人满意。结果表明,利用细菌16S rRNA基因V6高变区进行细菌多样性和分布分析是成功的,该地区的细菌群落不仅与其他冰川具有相同的细菌门类,而且还有自己的稀有物种。