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基于性状的模型开发以支持育种计划。以耐盐性和水稻为例。

Trait-based model development to support breeding programs. A case study for salt tolerance and rice.

机构信息

University of Milan, DISAA, Cassandra lab, via Celoria 2, 20133, Milano, Italy.

University of Milan, DEMM, Cassandra lab, via Celoria 2, 20133, Milano, Italy.

出版信息

Sci Rep. 2017 Jun 28;7(1):4352. doi: 10.1038/s41598-017-04022-y.

DOI:10.1038/s41598-017-04022-y
PMID:28659583
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5489522/
Abstract

Eco-physiological models are increasingly used to analyze G × E × M interactions to support breeding programs via the design of ideotypes for specific contexts. However, available crop models are only partly suitable for this purpose, since they often lack clear relationships between parameters and traits breeders are working on. Taking salt stress tolerance and rice as a case study, we propose a paradigm shift towards the building of ideotyping-specific models explicitly around traits involved in breeding programs. Salt tolerance is a complex trait relying on different physiological processes that can be alternatively selected to improve the overall crop tolerance. We developed a new model explicitly accounting for these traits and we evaluated its performance using data from growth chamber experiments (e.g., R ranged from 0.74 to 0.94 for the biomass of different plant organs). Using the model, we were able to show how an increase in the overall tolerance can derive from completely different physiological mechanisms according to soil/water salinity dynamics. The study demonstrated that a trait-based approach can increase the usefulness of mathematical models for supporting breeding programs.

摘要

生态生理模型越来越多地被用于分析 G×E×M 相互作用,通过为特定情境设计理想型来支持育种计划。然而,现有的作物模型在这方面仅部分适用,因为它们通常缺乏参数与育种者关注的性状之间的明确关系。以耐盐性和水稻为例,我们提出了一种范式转变,即朝着围绕育种计划中涉及的性状构建专门的理想型模型的方向发展。耐盐性是一个复杂的性状,依赖于不同的生理过程,可以通过替代选择来提高作物的整体耐盐性。我们开发了一个新模型,明确考虑了这些性状,并使用生长室实验的数据评估了其性能(例如,不同植物器官的生物量的 R 值范围从 0.74 到 0.94)。使用该模型,我们能够展示根据土壤/水盐度动态,整体耐受性的提高可以源自完全不同的生理机制。该研究表明,基于性状的方法可以提高数学模型在支持育种计划方面的有用性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e68e/5489522/d5e8f4fc6682/41598_2017_4022_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e68e/5489522/893b0d763f9f/41598_2017_4022_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e68e/5489522/da1319653f61/41598_2017_4022_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e68e/5489522/e999d8c5610e/41598_2017_4022_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e68e/5489522/d5e8f4fc6682/41598_2017_4022_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e68e/5489522/893b0d763f9f/41598_2017_4022_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e68e/5489522/da1319653f61/41598_2017_4022_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e68e/5489522/e999d8c5610e/41598_2017_4022_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e68e/5489522/d5e8f4fc6682/41598_2017_4022_Fig4_HTML.jpg

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2
Assessment of the Potential Impacts of Wheat Plant Traits across Environments by Combining Crop Modeling and Global Sensitivity Analysis.通过结合作物模型和全局敏感性分析评估小麦植株性状在不同环境下的潜在影响
PLoS One. 2016 Jan 22;11(1):e0146385. doi: 10.1371/journal.pone.0146385. eCollection 2016.
3
OsHKT1;4-mediated Na(+) transport in stems contributes to Na(+) exclusion from leaf blades of rice at the reproductive growth stage upon salt stress.
在盐胁迫下,生殖生长阶段水稻茎中由OsHKT1;4介导的钠离子转运有助于叶片中钠离子的外排。
BMC Plant Biol. 2016 Jan 19;16:22. doi: 10.1186/s12870-016-0709-4.
4
Climate change and soil salinity: The case of coastal Bangladesh.气候变化与土壤盐碱化:以孟加拉国沿海地区为例。
Ambio. 2015 Dec;44(8):815-26. doi: 10.1007/s13280-015-0681-5. Epub 2015 Jul 8.
5
Image-based phenotyping for non-destructive screening of different salinity tolerance traits in rice.基于图像的表型分析用于水稻不同耐盐性性状的无损筛选。
Rice (N Y). 2014 Dec;7(1):16. doi: 10.1186/s12284-014-0016-3. Epub 2014 Aug 14.
6
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J Exp Bot. 2015 Jun;66(12):3581-98. doi: 10.1093/jxb/erv049. Epub 2015 Mar 24.
7
Comparative Ni tolerance and accumulation potentials between Mesembryanthemum crystallinum (halophyte) and Brassica juncea: Metal accumulation, nutrient status and photosynthetic activity.冰叶日中花(盐生植物)和芥菜之间对镍的耐受性及积累潜力比较:金属积累、营养状况和光合活性
J Plant Physiol. 2014 Nov 1;171(17):1634-44. doi: 10.1016/j.jplph.2014.06.020. Epub 2014 Aug 9.
8
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Curr Opin Biotechnol. 2014 Apr;26:115-24. doi: 10.1016/j.copbio.2013.12.004. Epub 2014 Jan 9.
9
Recent molecular advances on downstream plant responses to abiotic stress.植物对非生物胁迫下游反应的最新分子进展。
Int J Mol Sci. 2012;13(7):8628-8647. doi: 10.3390/ijms13078628. Epub 2012 Jun 4.
10
A two-staged model of Na+ exclusion in rice explained by 3D modeling of HKT transporters and alternative splicing.利用 HKT 转运蛋白的三维建模和选择性剪接解释水稻钠离子排斥的两阶段模型。
PLoS One. 2012;7(7):e39865. doi: 10.1371/journal.pone.0039865. Epub 2012 Jul 11.