Hassan Rashida, Rounds Joshua, Sorenson Alida, Leos Greg, Concepción-Acevedo Jeniffer, Griswold Taylor, Tesfai Adiam, Blessington Tyann, Hardy Cerise, Basler Colin
MMWR Morb Mortal Wkly Rep. 2017 Jun 30;66(25):663-667. doi: 10.15585/mmwr.mm6625a2.
Foodborne salmonellosis causes an estimated 1 million illnesses and 400 deaths annually in the United States (1). Salmonella Anatum is one of the top 20 Salmonella serotypes in the United States. During 2013-2015 there were approximately 300-350 annual illnesses reported to PulseNet, the national molecular subtyping network for foodborne disease surveillance. In June 2016, PulseNet identified a cluster of 16 Salmonella Anatum infections with an indistinguishable pulsed-field gel electrophoresis (PFGE) pattern from four states.* In April 2016, the same PFGE pattern had been uploaded to PulseNet from an isolate obtained from an Anaheim pepper, a mild to medium hot pepper. Hot peppers include many pepper varieties, such as Anaheim, jalapeño, poblano, and serrano, which can vary in heat level from mild to very hot depending on the variety and preparation. This rare PFGE pattern had been seen only 24 times previously in the PulseNet database, compared with common PFGE patterns for this serotype which have been seen in the database hundreds of times. Local and state health departments, CDC, and the Food and Drug Administration (FDA) investigated to determine the cause of the outbreak. Thirty-two patients in nine states were identified with illness onsets from May 6-July 9, 2016. Whole-genome sequencing (WGS) was performed to characterize clinical isolates and the Anaheim pepper isolate further. The combined evidence indicated that fresh hot peppers were the likely source of infection; however, a single pepper type or source farm was not identified. This outbreak highlights challenges in reconciling epidemiologic and WGS data, and the difficulties of identifying ingredient-level exposures through epidemiologic investigations alone.
在美国,食源性沙门氏菌病每年估计导致100万人患病和400人死亡(1)。阿纳托姆沙门氏菌是美国排名前20的沙门氏菌血清型之一。在2013 - 2015年期间,每年向PulseNet(国家食源性疾病监测分子分型网络)报告的病例约有300 - 350例。2016年6月,PulseNet识别出16例阿纳托姆沙门氏菌感染病例组成的集群,这些病例来自四个州,其脉冲场凝胶电泳(PFGE)图谱无法区分。*2016年4月,从一个 Anaheim辣椒(一种微辣至中辣的辣椒)分离出的菌株上传到PulseNet的PFGE图谱与之相同。辣椒包括许多品种,如Anaheim、墨西哥胡椒、波布拉诺辣椒和塞拉诺辣椒,根据品种和烹饪方式的不同,其辣度可从微辣到极辣不等。这种罕见的PFGE图谱此前在PulseNet数据库中仅出现过24次,而该血清型常见的PFGE图谱在数据库中已出现过数百次。地方和州卫生部门、疾病控制与预防中心(CDC)以及食品药品监督管理局(FDA)进行了调查以确定疫情爆发的原因。确定了九个州的32名患者在2016年5月6日至7月9日期间发病。进行了全基因组测序(WGS)以进一步鉴定临床分离株和Anaheim辣椒分离株。综合证据表明,新鲜辣椒可能是感染源;然而,并未确定单一的辣椒品种或来源农场。此次疫情凸显了协调流行病学和WGS数据方面的挑战,以及仅通过流行病学调查确定成分层面暴露源的困难。