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一种大/小铁蛋白嵌合体的晶体结构揭示了蛋白质笼组装的指导原则。

The Crystal Structure of a Maxi/Mini-Ferritin Chimera Reveals Guiding Principles for the Assembly of Protein Cages.

作者信息

Cornell Thomas A, Srivastava Yogesh, Jauch Ralf, Fan Rongli, Orner Brendan P

机构信息

Department of Chemistry, King's College London , London, U.K.

Division of Chemistry and Biological Chemistry, Nanyang Technological University , Singapore.

出版信息

Biochemistry. 2017 Aug 1;56(30):3894-3899. doi: 10.1021/acs.biochem.7b00312. Epub 2017 Jul 21.

Abstract

Cage proteins assemble into nanoscale structures with large central cavities. They play roles, including those as virus capsids and chaperones, and have been applied to drug delivery and nanomaterials. Furthermore, protein cages have been used as model systems to understand and design protein quaternary structure. Ferritins are ubiquitous protein cages that manage iron homeostasis and oxidative damage. Two ferritin subfamilies have strongly similar tertiary structure yet distinct quaternary structure: maxi-ferritins normally assemble into 24-meric, octahedral cages with C-terminal E-helices centered around 4-fold symmetry axes, and mini-ferritins are 12-meric, tetrahedral cages with 3-fold axes defined by C-termini lacking E-domains. To understand the role E-domains play in ferritin quaternary structure, we previously designed a chimera of a maxi-ferritin E-domain fused to the C-terminus of a mini-ferritin. The chimera is a 12-mer cage midway in size between those of the maxi- and mini-ferritin. The research described herein sets out to understand (a) whether the increase in size over a typical mini-ferritin is due to a frozen state where the E-domain is flipped out of the cage and (b) whether the symmetrical preference of the E-domain in the maxi-ferritin (4-fold axis) overrules the C-terminal preference in the mini-ferritin (3-fold axis). With a 1.99 Å resolution crystal structure, we determined that the chimera assembles into a tetrahedral cage that can be nearly superimposed with the parent mini-ferritin, and that the E-domains are flipped external to the cage at the 3-fold symmetry axes.

摘要

笼状蛋白组装成具有大的中央腔的纳米级结构。它们发挥多种作用,包括作为病毒衣壳和伴侣蛋白,并且已被应用于药物递送和纳米材料领域。此外,蛋白笼已被用作模型系统来理解和设计蛋白质四级结构。铁蛋白是普遍存在的蛋白笼,负责铁稳态和氧化损伤的管理。两个铁蛋白亚家族具有非常相似的三级结构但不同的四级结构:大型铁蛋白通常组装成24聚体的八面体笼,其C端E螺旋围绕4重对称轴居中,而小型铁蛋白是12聚体的四面体笼,其3重轴由缺乏E结构域的C端定义。为了理解E结构域在铁蛋白四级结构中所起的作用,我们之前设计了一种嵌合体,将大型铁蛋白的E结构域融合到小型铁蛋白的C端。该嵌合体是一种12聚体笼,大小介于大型和小型铁蛋白之间。本文所述的研究旨在了解:(a)比典型小型铁蛋白更大的尺寸增加是否是由于E结构域从笼中翻转出来的冻结状态导致的,以及(b)大型铁蛋白中E结构域的对称偏好(4重轴)是否会推翻小型铁蛋白中C端的偏好(3重轴)。通过分辨率为1.99 Å的晶体结构,我们确定该嵌合体组装成一个四面体笼,其几乎可以与亲本小型铁蛋白叠加,并且E结构域在3重对称轴处翻转到笼外。

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