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不同孤山上的植物种群会相互交流吗?以奥克比尔景观中一种凤梨科植物的基因连通性为例的研究。

Do plant populations on distinct inselbergs talk to each other? A case study of genetic connectivity of a bromeliad species in an Ocbil landscape.

作者信息

Hmeljevski Karina Vanessa, Nazareno Alison Gonçalves, Leandro Bueno Marcelo, Dos Reis Maurício Sedrez, Forzza Rafaela Campostrini

机构信息

Rio de Janeiro Botanical Garden Rio de Janeiro RJ Brazil.

Department of Botany University of São Paulo São Paulo SP Brazil.

出版信息

Ecol Evol. 2017 May 23;7(13):4704-4716. doi: 10.1002/ece3.3038. eCollection 2017 Jul.

DOI:10.1002/ece3.3038
PMID:28690800
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5496560/
Abstract

Here, we explore the historical and contemporaneous patterns of connectivity among populations located on granitic inselbergs in an Ocbil landscape within the Brazilian Atlantic Forest, using both nuclear and chloroplast microsatellite markers. Beyond to assess the population genetic structure, we built species distribution models across four periods (current conditions, mid-Holocene, Last Glacial Maximum [LGM], and Last Interglacial) and inferred putative dispersal corridors using a least-cost path analysis to elucidate biogeographic patterns. Overall, high and significant genetic divergence was estimated among populations for both nuclear and plastid DNA (Φ = 0.463 and Φ = 0.961, respectively, < .001). For nuclear genome, almost total absence of genetic admixture among populations and very low migration rates were evident, corroborating with the very low estimates of immigration and emigration rates observed among populations. Based on the cpDNA results, putative dispersal routes in Sugar Loaf Land across cycles of climatic fluctuations in the Quaternary period revealed that the populations' connectivity changed little during those events. Genetic analyses highlighted the low genetic connectivity and long-term persistence of populations, and the founder effect and genetic drift seemed to have been very important processes that shaped the current diversity and genetic structure observed in both genomes. The genetic singularity of each population clearly shows the need for in situ conservation of all of them.

摘要

在这里,我们利用核微卫星标记和叶绿体微卫星标记,探索了巴西大西洋森林中奥比尔景观内花岗岩孤山上种群之间的历史和当代连通模式。除了评估种群遗传结构外,我们还构建了四个时期(当前条件、全新世中期、末次盛冰期[LGM]和末次间冰期)的物种分布模型,并使用最小成本路径分析推断假定的扩散走廊,以阐明生物地理模式。总体而言,核DNA和质体DNA在种群间的遗传分化都很高且显著(分别为Φ = 0.463和Φ = 0.961,< 0.001)。对于核基因组,种群间几乎完全没有遗传混合,迁移率非常低,这与在种群中观察到的极低的迁入和迁出率估计值相符。基于叶绿体DNA的结果,在第四纪气候波动周期中,面包山土地上假定的扩散路线表明,在这些事件中种群的连通性变化不大。遗传分析突出了种群的低遗传连通性和长期持续性,奠基者效应和遗传漂变似乎是塑造当前在两个基因组中观察到的多样性和遗传结构的非常重要的过程。每个种群的遗传独特性清楚地表明需要对它们全部进行原地保护。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3c7/5496560/e4c4b615fd74/ECE3-7-4704-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3c7/5496560/49e1742466ac/ECE3-7-4704-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3c7/5496560/53e6c322d489/ECE3-7-4704-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3c7/5496560/8995534b0186/ECE3-7-4704-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3c7/5496560/e4c4b615fd74/ECE3-7-4704-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3c7/5496560/49e1742466ac/ECE3-7-4704-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3c7/5496560/53e6c322d489/ECE3-7-4704-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3c7/5496560/8995534b0186/ECE3-7-4704-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3c7/5496560/e4c4b615fd74/ECE3-7-4704-g004.jpg

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本文引用的文献

1
SDMtoolbox 2.0: the next generation Python-based GIS toolkit for landscape genetic, biogeographic and species distribution model analyses.SDMtoolbox 2.0:用于景观遗传学、生物地理学和物种分布模型分析的新一代基于Python的地理信息系统工具包。
PeerJ. 2017 Dec 5;5:e4095. doi: 10.7717/peerj.4095. eCollection 2017.
2
ANALYZING TABLES OF STATISTICAL TESTS.分析统计检验表
Evolution. 1989 Jan;43(1):223-225. doi: 10.1111/j.1558-5646.1989.tb04220.x.
3
ESTIMATING F-STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE.估计用于群体结构分析的F统计量
Front Plant Sci. 2022 Sep 29;13:928577. doi: 10.3389/fpls.2022.928577. eCollection 2022.
4
From micro- to macroevolution: insights from a Neotropical bromeliad with high population genetic structure adapted to rock outcrops.从微观进化到宏观进化:来自具有适应石质露头的高种群遗传结构的新热带凤梨科植物的见解。
Heredity (Edinb). 2020 Nov;125(5):353-370. doi: 10.1038/s41437-020-0342-8. Epub 2020 Aug 27.
5
Sugarloaf Land in south-eastern Brazil: a tropical hotspot of lowland inselberg plant diversity.巴西东南部的甜面包山地区:低地孤峰植物多样性的热带热点地区。
Biodivers Data J. 2020 Jun 19;8:e53135. doi: 10.3897/BDJ.8.e53135. eCollection 2020.
6
Four raised to one equals one: A genetic approach to the complex does not follow a math rule.4的1次方等于1:对该复合体采用的遗传学方法并不遵循数学规则。
Ecol Evol. 2020 May 5;10(11):4562-4569. doi: 10.1002/ece3.6148. eCollection 2020 Jun.
7
Genetic diversity and karyotype of Pitcairnia azouryi: an endangered species of Bromeliaceae endemic to Atlantic Forest inselbergs.皮氏凤梨 Pitcairnia azouryi 的遗传多样性和核型:一种特有于大西洋森林孤峰上的濒危凤梨科物种。
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4
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BMC Evol Biol. 2016 Oct 13;16(1):213. doi: 10.1186/s12862-016-0779-9.
5
Coalescent Simulation and Paleodistribution Modeling for Tabebuia rosealba Do Not Support South American Dry Forest Refugia Hypothesis.玫瑰风铃木的溯祖模拟和古分布建模不支持南美干燥森林避难所假说。
PLoS One. 2016 Jul 26;11(7):e0159314. doi: 10.1371/journal.pone.0159314. eCollection 2016.
6
Combining the least cost path method with population genetic data and species distribution models to identify landscape connectivity during the late Quaternary in Himalayan hemlock.将成本最低路径法与种群遗传数据和物种分布模型相结合,以确定喜马拉雅铁杉在第四纪晚期的景观连通性。
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7
Clumpak: a program for identifying clustering modes and packaging population structure inferences across K.Clumpak:一个用于识别聚类模式并整合K值范围内群体结构推断结果的程序。
Mol Ecol Resour. 2015 Sep;15(5):1179-91. doi: 10.1111/1755-0998.12387. Epub 2015 Feb 27.
8
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9
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10
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