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兼性群居兰花蜂的核基因组和线粒体基因组

The Nuclear and Mitochondrial Genomes of the Facultatively Eusocial Orchid Bee .

作者信息

Brand Philipp, Saleh Nicholas, Pan Hailin, Li Cai, Kapheim Karen M, Ramírez Santiago R

机构信息

Department for Evolution and Ecology, Center for Population Biology, and University of California, Davis, California 95616

Graduate Group in Population Biology, University of California, Davis, California 95616.

出版信息

G3 (Bethesda). 2017 Sep 7;7(9):2891-2898. doi: 10.1534/g3.117.043687.

Abstract

Bees provide indispensable pollination services to both agricultural crops and wild plant populations, and several species of bees have become important models for the study of learning and memory, plant-insect interactions, and social behavior. Orchid bees (Apidae: Euglossini) are especially important to the fields of pollination ecology, evolution, and species conservation. Here we report the nuclear and mitochondrial genome sequences of the orchid bee Bembé & Eltz. was selected because it is widely distributed, highly abundant, and it was recently naturalized in the southeastern United States. We provide a high-quality assembly of the 3.3 Gb genome, and an official gene set of 15,904 gene annotations. We find high conservation of gene synteny with the honey bee throughout 80 MY of divergence time. This genomic resource represents the first draft genome of the orchid bee genus , and the first draft orchid bee mitochondrial genome, thus representing a valuable resource to the research community.

摘要

蜜蜂为农作物和野生植物种群提供不可或缺的授粉服务,并且几种蜜蜂已成为研究学习与记忆、植物 - 昆虫相互作用以及社会行为的重要模式生物。兰花蜂(蜜蜂科: Euglossini)在授粉生态学、进化和物种保护领域尤为重要。在此,我们报告了兰花蜂Bembé & Eltz的核基因组和线粒体基因组序列。选择它是因为它分布广泛、数量丰富,且最近在美国东南部归化。我们提供了一个高质量的3.3 Gb基因组组装以及一个包含15,904个基因注释的官方基因集。我们发现在8000万年的分化时间里,与蜜蜂的基因共线性具有高度保守性。这种基因组资源代表了兰花蜂属的首个基因组草图以及首个兰花蜂线粒体基因组草图,因此是研究界的宝贵资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3849/5592917/88ab18416d1d/2891f1.jpg

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