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一项比较研究首次揭示了帕克马努斯和德莫斯热液区沉积物中微生物群落的多样性和代谢情况。

A comparative study revealed first insights into the diversity and metabolisms of the microbial communities in the sediments of Pacmanus and Desmos hydrothermal fields.

作者信息

Wang Hai-Liang, Zhang Jian, Sun Qing-Lei, Lian Chao, Sun Li

机构信息

Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences, Qingdao, China.

Laboratory for Marine Biology and Biotechnology, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.

出版信息

PLoS One. 2017 Jul 12;12(7):e0181048. doi: 10.1371/journal.pone.0181048. eCollection 2017.

DOI:10.1371/journal.pone.0181048
PMID:28704556
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5507547/
Abstract

Currently, little is known about the microbial diversity in the sediments of Pacmanus and Desmos hydrothermal fields in Manus Basin. In this study, Illumina-based sequencing of 16S rRNA gene amplicons and metagenomic analysis were conducted to investigate the microbial populations and metabolic profiles in the sediments from four different regions in Pacmanus and Desmos hydrothermal fields. It was found that Gammaproteobacteria and Thaumarchaeota were the most abundant bacterial and archaeal populations, respectively. The autotrophic prokaryotes in the four communities probably fixed CO2 via four major pathways, i.e. Calvin-Benson-Bassham cycle, reductive acetyl-CoA cycle, rTCA cycle, and 3-hydroxypropionate/4-hydroxybutyrate cycle. Ammonia-oxidizing Thaumarchaeota, nitrifiers, denitrifiers, and sulfur oxidizers belonging to the subgroups of Proteobacteria (e.g., alpha, beta, gamma, and epsilon), Nitrospira, and Nitrospina, and sulfate-reducing Desulfobacterales likely played critical roles in nitrogen and sulfur cycling, in which ammonia, sulfur compounds, and hydrogen could be utilized as potential energy sources. These findings revealed new insights into the operational mechanism of the microbial communities associated with Pacmanus and Desmos hydrothermal fields.

摘要

目前,关于马努斯盆地帕克马努斯和德斯莫斯热液区沉积物中的微生物多样性,人们了解甚少。在本研究中,基于Illumina技术对16S rRNA基因扩增子进行测序,并开展宏基因组分析,以研究帕克马努斯和德斯莫斯热液区四个不同区域沉积物中的微生物种群和代谢谱。研究发现,γ-变形菌门和奇古菌门分别是最丰富的细菌和古菌种群。四个群落中的自养原核生物可能通过四种主要途径固定二氧化碳,即卡尔文-本森-巴斯姆循环、还原性乙酰辅酶A循环、还原性三羧酸循环和3-羟基丙酸/4-羟基丁酸循环。属于变形菌门(如α、β、γ和ε亚群)、硝化螺菌属和硝化刺菌属的氨氧化奇古菌、硝化细菌、反硝化细菌和硫氧化细菌,以及硫酸盐还原脱硫杆菌目可能在氮和硫循环中发挥关键作用,其中氨、硫化合物和氢气可作为潜在能源。这些发现揭示了与帕克马努斯和德斯莫斯热液区相关的微生物群落运行机制的新见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2228/5507547/0f07390058f0/pone.0181048.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2228/5507547/bca3dd25d9d1/pone.0181048.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2228/5507547/0da5e65b3a04/pone.0181048.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2228/5507547/34b5a9d88147/pone.0181048.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2228/5507547/8e28dfbca248/pone.0181048.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2228/5507547/631ebfb2ca50/pone.0181048.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2228/5507547/0f07390058f0/pone.0181048.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2228/5507547/bca3dd25d9d1/pone.0181048.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2228/5507547/0da5e65b3a04/pone.0181048.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2228/5507547/34b5a9d88147/pone.0181048.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2228/5507547/8e28dfbca248/pone.0181048.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2228/5507547/631ebfb2ca50/pone.0181048.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2228/5507547/0f07390058f0/pone.0181048.g006.jpg

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