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利用印度半岛南部的ISSR标记对本土无刺蜂(扁柄蜂属复合体)进行分子特征分析。

Molecular Characterization of the Indigenous Stingless Bees (Tetragonula spp. Complex) Using ISSR Marker from Southern Peninsular India.

作者信息

Nayak P P, Prakash J

机构信息

Centre for Applied Genetics, Dept of Zoology, Jnanabharathi Campus, Bangalore Univ, Bangalore, India.

Centre for Environmental Information System, Environmental Management & Policy Research Institute, "Hasiru Bhavana", Doresanipalya Forest Campus, Vinayakanagara Circle, J.P. Nagar 5th Phase, Bangalore, Karnataka, 560 078, India.

出版信息

Neotrop Entomol. 2018 Feb;47(1):106-117. doi: 10.1007/s13744-017-0538-7. Epub 2017 Jul 19.

Abstract

India is a country bestowed enormously with stingless bees, but genetic information about them is extremely minimal. This study focused to tap the geographic allocation, genetic variability, and differentiation among Tetragonula species complexes from natural and semi-urban habitats. Genetic analyses were assessed among 36 contrasting genotypes utilizing 20 ISSR primers. The dual combination exquisitely and productively amplified 245 DNA fragments at the loci, of which 240 bands were polymorphic (97.95%). Low to moderate level of genetic differentiation was detected from different estimators (Ht 0.29, G' 0.16, D 0.072, F 0.14, and Nm 2.68). Hierarchical clustering analysis aided to partition the individual genotypes into its respective five species group formed, aided by substantial bootstrap support values, but differing under morphological identification. It also provided valuable insight into the moderate eco-genetic diversity (H 0.39) prevailing from geographically scattered inhabitants. Potential exploitation of hyper-variable ISSR marker turned out fairly as a promising technique for finding valid polymorphisms and infers relevant variations. This baseline information enhances our understanding of the genetic status of the indigenous species from the country.

摘要

印度是一个拥有大量无刺蜂的国家,但关于它们的遗传信息却极为稀少。本研究旨在探究来自自然和半城市栖息地的扁柄蜂物种复合体之间的地理分布、遗传变异性和分化情况。利用20对ISSR引物对36种不同基因型进行了遗传分析。双重组合在这些位点上巧妙且高效地扩增出245个DNA片段,其中240条带具有多态性(97.95%)。从不同的估计值中检测到低至中等水平的遗传分化(Ht 0.29、G' 0.16、D 0.072、F 0.14和Nm 2.68)。层次聚类分析有助于将个体基因型划分为各自形成的五个物种组,得到了较高的自展支持值,但在形态学鉴定上存在差异。它还为地理上分散的居民中普遍存在的中等生态遗传多样性(H 0.39)提供了有价值的见解。超可变ISSR标记的潜在开发结果证明是一种寻找有效多态性并推断相关变异的有前途的技术。这些基础信息增进了我们对该国本土物种遗传状况的了解。

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