Vectorology and Anticancer Therapies, UMR 8203, CNRS, Univ. Paris-Sud, Gustave Roussy, Université Paris-Saclay, Villejuif, France.
Laboratory of Translational Research and Biobank, AMMICA, INSERM US23/CNRS UMS3655, Department of Medical Biology and Pathology, Gustave Roussy, Villejuif, France.
Clin Cancer Res. 2017 Oct 15;23(20):6101-6112. doi: 10.1158/1078-0432.CCR-17-0381. Epub 2017 Jul 21.
This single-institutional feasibility study prospectively characterized genomic alterations in recurrent or refractory solid tumors of pediatric patients to select a targeted therapy. Following treatment failure, patients with signed consent and ages above 6 months, underwent tumor biopsy or surgical resection of primary or metastatic tumor site. These newly acquired samples were analyzed by comparative genomic hybridization array, next-generation sequencing for 75 target genes, whole-exome and RNA sequencing. Biological significance of the alterations and suggestion of most relevant targeted therapies available were discussed in a multidisciplinary tumor board. From December 2012 to January 2016, 75 patients were included, 73 patients underwent 79 interventions, 56 of which were research biopsies with a low complication rate. All patients were pretreated, 37.0% had a brain tumor, and 63.0% had an extra-cranial solid tumor. Median tumor cell content was 70% (range, 0%-100%). Successful molecular analysis in 69 patients detected in 60.9% of patients an actionable alteration in various oncogenic pathways (42.4% with copy-number change, 33.3% with mutation, 2.1% with fusion), and change in diagnosis in three patients. Fourteen patients received 17 targeted therapies; two had received a matched treatment before inclusion. Research biopsies are feasible in advanced pediatric malignancies that exhibit a considerable amount of potentially actionable alterations. Genetic events affecting different cancer hallmarks and limited access to targeted agents within pediatric clinical trials remain the main obstacles that are addressed in our two subsequent precision medicine studies MAPPYACTS and AcSé-ESMART. .
这项单机构可行性研究前瞻性地描述了儿科患者复发性或难治性实体瘤的基因组改变,以选择靶向治疗。治疗失败后,签署同意书且年龄大于 6 个月的患者进行肿瘤活检或原发性或转移性肿瘤部位的手术切除。这些新获得的样本通过比较基因组杂交阵列、75 个靶基因的下一代测序、全外显子组和 RNA 测序进行分析。在多学科肿瘤委员会中讨论了改变的生物学意义和最相关的现有靶向治疗建议。从 2012 年 12 月到 2016 年 1 月,共纳入 75 例患者,73 例患者接受了 79 次干预,其中 56 次为低并发症率的研究性活检。所有患者均经预处理,37.0%患有脑瘤,63.0%患有颅外实体瘤。中位肿瘤细胞含量为 70%(范围,0%-100%)。69 例患者的成功分子分析在各种致癌途径中发现 60.9%的患者存在可操作改变(42.4%的患者存在拷贝数改变,33.3%的患者存在突变,2.1%的患者存在融合),并在 3 例患者中改变了诊断。14 例患者接受了 17 种靶向治疗;其中 2 例在入组前接受了匹配治疗。在表现出大量潜在可操作改变的晚期儿科恶性肿瘤中,研究性活检是可行的。影响不同癌症特征的遗传事件和儿科临床试验中靶向药物的有限获得仍然是我们随后的两项精准医学研究 MAPPYACTS 和 AcSé-ESMART 中解决的主要障碍。