a Laboratory of Regulation of Gene Expression , Institute of Microbiology ASCR , Videnska, Prague , the Czech Republic.
b Department of Genetics and Microbiology, Faculty of Science , Charles University in Prague , Vinicna, Prague , the Czech Republic.
RNA Biol. 2017 Dec 2;14(12):1660-1667. doi: 10.1080/15476286.2017.1353863. Epub 2017 Sep 15.
Reinitiation after translation of short upstream ORFs (uORFs) represents one of the means of regulation of gene expression on the mRNA-specific level in response to changing environmental conditions. Over the years it has been shown-mainly in budding yeast-that its efficiency depends on cis-acting features occurring in sequences flanking reinitiation-permissive uORFs, the nature of their coding sequences, as well as protein factors acting in trans. We earlier demonstrated that the first two uORFs from the reinitiation-regulated yeast GCN4 mRNA leader carry specific structural elements in their 5' sequences that interact with the translation initiation factor eIF3 to prevent full ribosomal recycling post their translation. Actually, this interaction turned out to be instrumental in stabilizing the mRNA·40S post-termination complex, which is thus capable to eventually resume scanning and reinitiate on the next AUG start site downstream. Recently, we also provided important in vivo evidence strongly supporting the long-standing idea that to stimulate reinitiation, eIF3 has to remain bound to ribosomes elongating these uORFs until their stop codon has been reached. Here we examined the importance of eIF3 and sequences flanking uORF1 of the human functional homolog of yeast GCN4, ATF4, in stimulation of efficient reinitiation. We revealed that the molecular basis of the reinitiation mechanism is conserved between yeasts and humans.
上游起始密码子(uORFs)翻译后的再起始是 mRNA 水平上响应环境变化调节基因表达的一种方式。多年来,人们主要在芽殖酵母中发现,其效率取决于侧翼再起始允许 uORFs 的顺式作用特征、其编码序列的性质以及反式作用的蛋白质因子。我们之前证明,再起始调控的酵母 GCN4 mRNA 前导区的前两个 uORFs 在其 5' 序列中具有特定的结构元件,与翻译起始因子 eIF3 相互作用,以防止其翻译后核糖体完全回收。实际上,这种相互作用对于稳定 mRNA·40S 终止后复合物至关重要,因此最终能够在下一个下游 AUG 起始位点重新扫描和起始。最近,我们还提供了重要的体内证据,有力地支持了一个长期存在的观点,即刺激再起始,eIF3 必须与正在延伸这些 uORFs 的核糖体结合,直到它们的终止密码子被读取。在这里,我们研究了人类 GCN4 功能同源物 ATF4 的 uORF1 侧翼序列和 eIF3 在刺激有效再起始中的重要性。我们揭示了在酵母和人类之间,再起始机制的分子基础是保守的。