• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

生物地理学和有机物去除塑造了木材采伐对森林土壤微生物群落的长期影响。

Biogeography and organic matter removal shape long-term effects of timber harvesting on forest soil microbial communities.

作者信息

Wilhelm Roland C, Cardenas Erick, Maas Kendra R, Leung Hilary, McNeil Larisa, Berch Shannon, Chapman William, Hope Graeme, Kranabetter J M, Dubé Stephane, Busse Matt, Fleming Robert, Hazlett Paul, Webster Kara L, Morris David, Scott D Andrew, Mohn William W

机构信息

Department of Microbiology &Immunology, Life Sciences Institute, University of British Columbia, Vancouver, British Columbia, Canada.

British Columbia Ministry of Forests, Lands and Natural Resource Operations, Victoria, British Columbia, Canada.

出版信息

ISME J. 2017 Nov;11(11):2552-2568. doi: 10.1038/ismej.2017.109. Epub 2017 Jul 28.

DOI:10.1038/ismej.2017.109
PMID:28753210
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5649165/
Abstract

The growing demand for renewable, carbon-neutral materials and energy is leading to intensified forest land-use. The long-term ecological challenges associated with maintaining soil fertility in managed forests are not yet known, in part due to the complexity of soil microbial communities and the heterogeneity of forest soils. This study determined the long-term effects of timber harvesting, accompanied by varied organic matter (OM) removal, on bacterial and fungal soil populations in 11- to 17-year-old reforested coniferous plantations at 18 sites across North America. Analysis of highly replicated 16 S rRNA gene and ITS region pyrotag libraries and shotgun metagenomes demonstrated consistent changes in microbial communities in harvested plots that included the expansion of desiccation- and heat-tolerant organisms and decline in diversity of ectomycorrhizal fungi. However, the majority of taxa, including the most abundant and cosmopolitan groups, were unaffected by harvesting. Shifts in microbial populations that corresponded to increased temperature and soil dryness were moderated by OM retention, which also selected for sub-populations of fungal decomposers. Biogeographical differences in the distribution of taxa as well as local edaphic and environmental conditions produced substantial variation in the effects of harvesting. This extensive molecular-based investigation of forest soil advances our understanding of forest disturbance and lays the foundation for monitoring long-term impacts of timber harvesting.

摘要

对可再生、碳中和材料和能源日益增长的需求正导致林地利用的强化。与维持人工林中土壤肥力相关的长期生态挑战尚不清楚,部分原因是土壤微生物群落的复杂性和森林土壤的异质性。本研究确定了木材采伐(伴随不同程度的有机质去除)对北美18个地点11至17年生重新造林的针叶人工林中细菌和真菌土壤种群的长期影响。对高度重复的16S rRNA基因和ITS区域焦磷酸测序文库以及鸟枪法宏基因组的分析表明,采伐地块中的微生物群落发生了一致的变化,包括耐旱和耐热生物的扩张以及外生菌根真菌多样性的下降。然而,大多数分类群,包括最丰富和分布最广的类群,不受采伐影响。与温度升高和土壤干燥相关的微生物种群变化通过有机质保留得到缓解,有机质保留还选择了真菌分解者的亚种群。分类群分布的生物地理差异以及当地土壤和环境条件导致采伐影响存在很大差异。这项基于分子的对森林土壤的广泛调查增进了我们对森林干扰的理解,并为监测木材采伐的长期影响奠定了基础。

相似文献

1
Biogeography and organic matter removal shape long-term effects of timber harvesting on forest soil microbial communities.生物地理学和有机物去除塑造了木材采伐对森林土壤微生物群落的长期影响。
ISME J. 2017 Nov;11(11):2552-2568. doi: 10.1038/ismej.2017.109. Epub 2017 Jul 28.
2
Long-term effects of timber harvesting on hemicellulolytic microbial populations in coniferous forest soils.木材采伐对针叶林土壤中半纤维素分解微生物种群的长期影响。
ISME J. 2016 Feb;10(2):363-75. doi: 10.1038/ismej.2015.118. Epub 2015 Aug 14.
3
Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests.采伐对北方针叶林土壤微生物群落的显著和持久影响。
ISME J. 2012 Dec;6(12):2199-218. doi: 10.1038/ismej.2012.84. Epub 2012 Aug 2.
4
A metagenomic survey of forest soil microbial communities more than a decade after timber harvesting.采伐后十余年森林土壤微生物群落的宏基因组学调查。
Sci Data. 2017 Jul 25;4:170092. doi: 10.1038/sdata.2017.92. eCollection 2017.
5
Effects of forest age and season on soil microbial communities in Chinese fir plantations.林龄和季节对杉木人工林土壤微生物群落的影响。
Microbiol Spectr. 2024 Aug 6;12(8):e0407523. doi: 10.1128/spectrum.04075-23. Epub 2024 Jul 9.
6
Determinants of Soil Bacterial and Fungal Community Composition Toward Carbon-Use Efficiency Across Primary and Secondary Forests in a Costa Rican Conservation Area.哥斯达黎加保护区内主要和次要森林中土壤细菌和真菌群落组成对碳利用效率的决定因素。
Microb Ecol. 2019 Jan;77(1):148-167. doi: 10.1007/s00248-018-1206-0. Epub 2018 Jun 1.
7
Non-symbiotic soil microbes are more strongly influenced by altered tree biodiversity than arbuscular mycorrhizal fungi during initial forest establishment.在森林建立初期,非共生土壤微生物受树木生物多样性改变的影响比丛枝菌根真菌更强。
FEMS Microbiol Ecol. 2019 Oct 1;95(10). doi: 10.1093/femsec/fiz134.
8
Long-Term Enrichment of Stress-Tolerant Cellulolytic Soil Populations following Timber Harvesting Evidenced by Multi-Omic Stable Isotope Probing.多组学稳定同位素探测证明木材采伐后耐胁迫纤维素分解土壤菌群的长期富集。
Front Microbiol. 2017 Apr 11;8:537. doi: 10.3389/fmicb.2017.00537. eCollection 2017.
9
Limited Effects of Variable-Retention Harvesting on Fungal Communities Decomposing Fine Roots in Coastal Temperate Rainforests.变持有收获对沿海温带雨林分解细根真菌群落的影响有限。
Appl Environ Microbiol. 2018 Jan 17;84(3). doi: 10.1128/AEM.02061-17. Print 2018 Feb 1.
10
Long lasting effects of the conversion from natural forest to poplar plantation on soil microbial communities.天然林转变为杨树人工林对土壤微生物群落的长期影响。
Microbiol Res. 2016 Jan;182:89-98. doi: 10.1016/j.micres.2015.10.002. Epub 2015 Oct 20.

引用本文的文献

1
Variation in genomic traits of microbial communities among ecosystems.生态系统中微生物群落基因组特征的变异。
FEMS Microbes. 2021 Dec 1;2:xtab020. doi: 10.1093/femsmc/xtab020. eCollection 2021.
2
Microbial gradual shifts during the process of species replacement in Taihang Mountain.太行山物种替代过程中的微生物渐变
Front Microbiol. 2023 Apr 5;14:1158731. doi: 10.3389/fmicb.2023.1158731. eCollection 2023.
3
Ecological insights into soil health according to the genomic traits and environment-wide associations of bacteria in agricultural soils.基于农业土壤中细菌的基因组特征和全环境关联对土壤健康的生态学见解。
ISME Commun. 2023 Jan 9;3(1):1. doi: 10.1038/s43705-022-00209-1.
4
Towards the biogeography of prokaryotic genes.朝向原核生物基因的生物地理学。
Nature. 2022 Jan;601(7892):252-256. doi: 10.1038/s41586-021-04233-4. Epub 2021 Dec 15.
5
Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations.原生草原土壤微生物群落对水分扰动的元表型反应
mSystems. 2019 Jun 11;4(4):e00061-19. doi: 10.1128/mSystems.00061-19.
6
Bacterial contributions to delignification and lignocellulose degradation in forest soils with metagenomic and quantitative stable isotope probing.利用宏基因组和定量稳定同位素探测技术研究森林土壤中细菌对木质素脱木质和木质纤维素降解的贡献。
ISME J. 2019 Feb;13(2):413-429. doi: 10.1038/s41396-018-0279-6. Epub 2018 Sep 26.
7
Following the terrestrial tracks of Caulobacter - redefining the ecology of a reputed aquatic oligotroph.沿着土壤杆菌的陆地轨迹——重新定义一个著名的水生贫营养生物的生态。
ISME J. 2018 Dec;12(12):3025-3037. doi: 10.1038/s41396-018-0257-z. Epub 2018 Aug 14.
8
A metagenomic survey of forest soil microbial communities more than a decade after timber harvesting.采伐后十余年森林土壤微生物群落的宏基因组学调查。
Sci Data. 2017 Jul 25;4:170092. doi: 10.1038/sdata.2017.92. eCollection 2017.

本文引用的文献

1
A metagenomic survey of forest soil microbial communities more than a decade after timber harvesting.采伐后十余年森林土壤微生物群落的宏基因组学调查。
Sci Data. 2017 Jul 25;4:170092. doi: 10.1038/sdata.2017.92. eCollection 2017.
2
Long-Term Enrichment of Stress-Tolerant Cellulolytic Soil Populations following Timber Harvesting Evidenced by Multi-Omic Stable Isotope Probing.多组学稳定同位素探测证明木材采伐后耐胁迫纤维素分解土壤菌群的长期富集。
Front Microbiol. 2017 Apr 11;8:537. doi: 10.3389/fmicb.2017.00537. eCollection 2017.
3
Relic DNA is abundant in soil and obscures estimates of soil microbial diversity.遗迹DNA在土壤中大量存在,会模糊对土壤微生物多样性的估计。
Nat Microbiol. 2016 Dec 19;2:16242. doi: 10.1038/nmicrobiol.2016.242.
4
Microbial Diversity in Soil, Sand Dune and Rock Substrates of the Thar Monsoon Desert, India.印度塔尔季风沙漠土壤、沙丘和岩石基质中的微生物多样性。
Indian J Microbiol. 2016 Mar;56(1):35-45. doi: 10.1007/s12088-015-0549-1. Epub 2015 Aug 21.
5
Ectomycorrhizal fungal spore bank recovery after a severe forest fire: some like it hot.严重森林火灾后外生菌根真菌孢子库的恢复:有些喜欢高温。
ISME J. 2016 May;10(5):1228-39. doi: 10.1038/ismej.2015.182. Epub 2015 Oct 16.
6
Long-term effects of timber harvesting on hemicellulolytic microbial populations in coniferous forest soils.木材采伐对针叶林土壤中半纤维素分解微生物种群的长期影响。
ISME J. 2016 Feb;10(2):363-75. doi: 10.1038/ismej.2015.118. Epub 2015 Aug 14.
7
Forest harvesting reduces the soil metagenomic potential for biomass decomposition.森林采伐降低了土壤中生物量分解的宏基因组潜力。
ISME J. 2015 Nov;9(11):2465-76. doi: 10.1038/ismej.2015.57. Epub 2015 Apr 24.
8
Non-symbiotic Bradyrhizobium ecotypes dominate North American forest soils.非共生慢生根瘤菌生态型在北美森林土壤中占主导地位。
ISME J. 2015 Nov;9(11):2435-41. doi: 10.1038/ismej.2015.54. Epub 2015 Apr 24.
9
limma powers differential expression analyses for RNA-sequencing and microarray studies.limma为RNA测序和微阵列研究提供差异表达分析的动力。
Nucleic Acids Res. 2015 Apr 20;43(7):e47. doi: 10.1093/nar/gkv007. Epub 2015 Jan 20.
10
Vertical distribution of the soil microbiota along a successional gradient in a glacier forefield.冰川前缘土壤微生物群沿演替梯度的垂直分布
Mol Ecol. 2015 Mar;24(5):1091-108. doi: 10.1111/mec.13051. Epub 2015 Jan 21.