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使用过渡态类似物印迹人工酶催化氨基酸对硝基苯胺的酰胺分解:吡啶部分的协同作用

Catalytic amidolysis of amino acid p-nitroanilides using transition state analogue imprinted artificial enzymes: Cooperative effect of pyridine moiety.

作者信息

Divya Mathew, Benny Thomas, Christy Philip, Aparna E P, Devaky K S

机构信息

School of Chemical Sciences, Mahatma Gandhi University, Kottayam-686 560, India.

School of Chemical Sciences, Mahatma Gandhi University, Kottayam-686 560, India; Department of Chemistry, St Berchmans College, Changanassery-686 101, India.

出版信息

Bioorg Chem. 2017 Oct;74:91-103. doi: 10.1016/j.bioorg.2017.07.015. Epub 2017 Jul 25.

Abstract

Enzyme-like polymer catalysts with the imprints of phosphonate transition state analogue (TSA) lined along with imidazole and pyridine moieties were synthesized using methacryloyl-l-histidine and 4-vinylpyridine as the functional monomers and phenyl-1-(N-benzyloxycarbonylamino)-2-(phenyl)ethyl phosphonate - the TSA of hydrolytic reaction as the template for the amidolysis of N-benzyloxycarbonyl-l-phenylalanine p-nitroanilide (Z-l-Phe-PNA). Polymers containing different functional groups can act together to provide catalytic activity and selectivity superior to what can be obtained from monofunctional analogues. The higher rate acceleration exhibited by the bifunctional polymer over the monofunctional polymers indicates cooperative catalysis of imidazole and pyridine moieties. The optimum catalytic competence is shown by the bifunctional polymer containing imidazole and pyridine moieties in 2:1M ratio which may be due to alignment of the functional groups in proper H-bond distance. In addition to the non-covalent interactions like hydrogen bonding or π-stacking interactions between the functional groups of the polymer and the template, 3D-microcavities complementary to the geometry of the template are necessary for effective shape selective binding. Michaelis-Menten kinetics implies that only the catalysts with imidazole moieties act as enzyme-like catalysts and imidazole is the key catalytic function of the enzyme mimics.

摘要

以甲基丙烯酰基 - l - 组氨酸和4 - 乙烯基吡啶为功能单体,苯基 - 1 - (N - 苄氧羰基氨基) - 2 - (苯基)乙基膦酸酯(水解反应的过渡态类似物,即TSA)为模板,用于N - 苄氧羰基 - l - 苯丙氨酸对硝基苯胺(Z - l - Phe - PNA)的酰胺水解反应,合成了带有膦酸酯过渡态类似物(TSA)印记且排列有咪唑和吡啶部分的类酶聚合物催化剂。含有不同官能团的聚合物可以共同作用,提供优于单官能类似物的催化活性和选择性。双官能聚合物比单官能聚合物表现出更高的速率加速,这表明咪唑和吡啶部分存在协同催化作用。含有2:1摩尔比咪唑和吡啶部分的双官能聚合物表现出最佳催化能力,这可能是由于官能团以适当的氢键距离排列。除了聚合物官能团与模板之间的氢键或π - 堆积等非共价相互作用外,与模板几何形状互补的三维微腔对于有效的形状选择性结合也是必要的。米氏动力学表明,只有带有咪唑部分的催化剂才作为类酶催化剂起作用,且咪唑是模拟酶的关键催化功能。

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