Shi Yuhu, Zeng Weiming, Wang Nizhuan
Lab of Digital Image and Intelligent Computation, Shanghai Maritime University, 1550 Harbor Avenue, Pudong, Shanghai, 201306, China.
Lab of Digital Image and Intelligent Computation, Shanghai Maritime University, 1550 Harbor Avenue, Pudong, Shanghai, 201306, China.
Comput Methods Programs Biomed. 2017 Sep;148:137-151. doi: 10.1016/j.cmpb.2017.07.001. Epub 2017 Jul 4.
With the rapid development of big data, the functional magnetic resonance imaging (fMRI) data analysis of multi-subject is becoming more and more important. As a kind of blind source separation technique, group independent component analysis (GICA) has been widely applied for the multi-subject fMRI data analysis. However, spatial concatenated GICA is rarely used compared with temporal concatenated GICA due to its disadvantages.
In this paper, in order to overcome these issues and to consider that the ability of GICA for fMRI data analysis can be improved by adding a priori information, we propose a novel spatial concatenation based GICA with reference (SCGICAR) method to take advantage of the priori information extracted from the group subjects, and then the multi-objective optimization strategy is used to implement this method. Finally, the post-processing means of principal component analysis and anti-reconstruction are used to obtain group spatial component and individual temporal component in the group, respectively.
The experimental results show that the proposed SCGICAR method has a better performance on both single-subject and multi-subject fMRI data analysis compared with classical methods. It not only can detect more accurate spatial and temporal component for each subject of the group, but also can obtain a better group component on both temporal and spatial domains.
These results demonstrate that the proposed SCGICAR method has its own advantages in comparison with classical methods, and it can better reflect the commonness of subjects in the group.
随着大数据的快速发展,多主体功能磁共振成像(fMRI)数据分析变得越来越重要。作为一种盲源分离技术,组独立成分分析(GICA)已被广泛应用于多主体fMRI数据分析。然而,由于其缺点,与时间串联GICA相比,空间串联GICA很少被使用。
在本文中,为了克服这些问题,并考虑到通过添加先验信息可以提高GICA对fMRI数据分析的能力,我们提出了一种基于空间串联的带参考的GICA(SCGICAR)新方法,以利用从组主体中提取的先验信息,然后使用多目标优化策略来实现该方法。最后,分别使用主成分分析和反重建的后处理手段在组中获得组空间成分和个体时间成分。
实验结果表明,与经典方法相比,所提出的SCGICAR方法在单主体和多主体fMRI数据分析中均具有更好的性能。它不仅可以为组中的每个主体检测到更准确的空间和时间成分,而且可以在时间和空间域上获得更好的组成分。
这些结果表明,所提出的SCGICAR方法与经典方法相比具有自身优势,并且可以更好地反映组中主体的共性。