Suppr超能文献

心血管和肾脏疾病大鼠模型中的环状 RNA

Circular RNAs in rat models of cardiovascular and renal diseases.

机构信息

Program in Physiological Genomics, Center for Hypertension and Personalized Medicine, Department of Physiology and Pharmacology, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio;

Program in Physiological Genomics, Center for Hypertension and Personalized Medicine, Department of Physiology and Pharmacology, University of Toledo College of Medicine and Life Sciences, Toledo, Ohio.

出版信息

Physiol Genomics. 2017 Sep 1;49(9):484-490. doi: 10.1152/physiolgenomics.00064.2017. Epub 2017 Aug 4.

Abstract

Circular RNAs (circRNAs) have emerged as an important new class of genomic regulatory molecules contributing to the development of various diseases, but their relevance to the development and progression of hypertension remains largely unknown. A major impediment to begin studying circRNAs in rat models of inherited hypertension is that the rat as a valuable model of human diseases lags far behind the mouse and human in providing knowledge on circRNAs. In this study, a genome-wide circRNA profiling was performed from four rat strains that are widely used in hypertension research: the Dahl salt-sensitive rat (S), the Dahl salt-resistant rat (R), the spontaneously hypertensive rat (SHR), and the Wistar Kyoto rat (WKY). Combined hybridization data obtained from these four strains allowed for the identification of 12,846 circRNAs as being expressed in the rat kidneys. Out of these, 318 and 110 circRNAs were differentially expressed with a fold change > 1.5 ( < 0.05) in S vs. R and SHR vs. WKY, respectively. Among these circRNAs, circRNA/microRNA interaction was predicted since circRNAs are known as microRNA sponges to sequester microRNAs. Several circRNAs were further validated by quantitative real-time PCR. To our knowledge, our study is the primary report of profiling circRNAs in renal tissue and illustrates that circRNAs could be candidate genetic factors controlling blood pressure.

摘要

环状 RNA(circRNAs)作为一类重要的基因组调控分子,参与多种疾病的发生发展,但它们与高血压的发生和进展的相关性在很大程度上尚不清楚。在遗传性高血压的大鼠模型中开始研究 circRNAs 的主要障碍是,大鼠作为人类疾病的一种有价值的模型,在提供 circRNAs 知识方面远远落后于小鼠和人类。在这项研究中,对广泛用于高血压研究的四种大鼠品系(Dahl 盐敏感大鼠[S]、Dahl 盐抵抗大鼠[R]、自发性高血压大鼠[SHR]和 Wistar Kyoto 大鼠[WKY])进行了全基因组 circRNA 谱分析。从这四个品系获得的杂交数据组合允许鉴定出 12846 个在大鼠肾脏中表达的 circRNAs。其中,318 个和 110 个 circRNAs 在 S 与 R 之间和 SHR 与 WKY 之间的差异表达倍数 >1.5(<0.05)。在这些 circRNAs 中,由于 circRNAs 作为 microRNA 海绵来隔离 microRNAs,因此预测了 circRNA/microRNA 相互作用。通过定量实时 PCR 进一步验证了几个 circRNAs。据我们所知,我们的研究是首次对肾脏组织中的 circRNAs 进行谱分析,并表明 circRNAs 可能是控制血压的候选遗传因素。

相似文献

1
Circular RNAs in rat models of cardiovascular and renal diseases.
Physiol Genomics. 2017 Sep 1;49(9):484-490. doi: 10.1152/physiolgenomics.00064.2017. Epub 2017 Aug 4.
3
Circular RNA expression profile of articular chondrocytes in an IL-1β-induced mouse model of osteoarthritis.
Gene. 2018 Feb 20;644:20-26. doi: 10.1016/j.gene.2017.12.020. Epub 2017 Dec 14.
4
Genome-wide identification of long noncoding RNAs in rat models of cardiovascular and renal disease.
Hypertension. 2015 Jan;65(1):200-10. doi: 10.1161/HYPERTENSIONAHA.114.04498. Epub 2014 Nov 10.
5
Expression Profiles of Circular RNA in Aortic Vascular Tissues of Spontaneously Hypertensive Rats.
Front Cardiovasc Med. 2021 Dec 20;8:814402. doi: 10.3389/fcvm.2021.814402. eCollection 2021.
6
Differential circRNA expression profiles during the BMP2-induced osteogenic differentiation of MC3T3-E1 cells.
Biomed Pharmacother. 2017 Jun;90:492-499. doi: 10.1016/j.biopha.2017.03.051. Epub 2017 Apr 7.
7
Identification and characterization of circular RNAs in rapid atrial pacing dog atrial tissue.
Biochem Biophys Res Commun. 2018 Nov 17;506(1):1-6. doi: 10.1016/j.bbrc.2018.05.082. Epub 2018 Oct 30.
9
Circular RNA profile of infantile hemangioma by microarray analysis.
PLoS One. 2017 Nov 2;12(11):e0187581. doi: 10.1371/journal.pone.0187581. eCollection 2017.

引用本文的文献

1
Circular RNAs as a Diagnostic and Therapeutic Target in Cardiovascular Diseases.
Int J Mol Sci. 2023 Jan 21;24(3):2125. doi: 10.3390/ijms24032125.
2
circMTND5 Participates in Renal Mitochondrial Injury and Fibrosis by Sponging MIR6812 in Lupus Nephritis.
Oxid Med Cell Longev. 2022 Oct 11;2022:2769487. doi: 10.1155/2022/2769487. eCollection 2022.
3
Circular RNAs as Novel Diagnostic Biomarkers and Therapeutic Targets in Kidney Disease.
Front Med (Lausanne). 2021 Sep 16;8:714958. doi: 10.3389/fmed.2021.714958. eCollection 2021.
4
Circular RNAs in kidney disease and cancer.
Nat Rev Nephrol. 2021 Dec;17(12):814-826. doi: 10.1038/s41581-021-00465-9. Epub 2021 Aug 11.
5
The emerging role of circular RNAs in cardiovascular diseases.
J Physiol Biochem. 2021 Aug;77(3):343-353. doi: 10.1007/s13105-021-00807-y. Epub 2021 Mar 27.
7
Identification of Candidate Biomarkers for Salt Sensitivity of Blood Pressure by Integrated Bioinformatics Analysis.
Front Genet. 2020 Sep 3;11:988. doi: 10.3389/fgene.2020.00988. eCollection 2020.
8
Circular RNA in renal diseases.
J Cell Mol Med. 2020 Jun;24(12):6523-6533. doi: 10.1111/jcmm.15295. Epub 2020 Apr 25.
9
Hsa_circ_0011385 accelerates the progression of thyroid cancer by targeting miR-361-3p.
Cancer Cell Int. 2020 Feb 13;20:49. doi: 10.1186/s12935-020-1120-7. eCollection 2020.
10
CircNr1h4 regulates the pathological process of renal injury in salt-sensitive hypertensive mice by targeting miR-155-5p.
J Cell Mol Med. 2020 Jan;24(2):1700-1712. doi: 10.1111/jcmm.14863. Epub 2019 Nov 28.

本文引用的文献

1
Microarray expression profile of circular RNAs in chronic thromboembolic pulmonary hypertension.
Medicine (Baltimore). 2017 Jul;96(27):e7354. doi: 10.1097/MD.0000000000007354.
2
Profiling and bioinformatics analyses reveal differential circular RNA expression in hypertensive patients.
Clin Exp Hypertens. 2017;39(5):454-459. doi: 10.1080/10641963.2016.1273944. Epub 2017 May 23.
3
Circular RNAs as potential biomarkers for cancer diagnosis and therapy.
Am J Cancer Res. 2016 Jun 1;6(6):1167-76. eCollection 2016.
4
Roles of Circular RNAs in Neurologic Disease.
Front Mol Neurosci. 2016 Apr 13;9:25. doi: 10.3389/fnmol.2016.00025. eCollection 2016.
6
The Circular RNA Cdr1as Promotes Myocardial Infarction by Mediating the Regulation of miR-7a on Its Target Genes Expression.
PLoS One. 2016 Mar 21;11(3):e0151753. doi: 10.1371/journal.pone.0151753. eCollection 2016.
8
A circular RNA protects the heart from pathological hypertrophy and heart failure by targeting miR-223.
Eur Heart J. 2016 Sep 1;37(33):2602-11. doi: 10.1093/eurheartj/ehv713. Epub 2016 Jan 21.
9
Improving microRNA target prediction by modeling with unambiguously identified microRNA-target pairs from CLIP-ligation studies.
Bioinformatics. 2016 May 1;32(9):1316-22. doi: 10.1093/bioinformatics/btw002. Epub 2016 Jan 6.
10
MicroRNA-7: a promising new target in cancer therapy.
Cancer Cell Int. 2015 Oct 29;15:103. doi: 10.1186/s12935-015-0259-0. eCollection 2015.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验