CAS Key Laboratory of Genomic and Precision Medicine, Beijing Institute of Genomics, Chinese Academy of Sciences, Beijing, 100101, China.
University of Chinese Academy of Sciences, Beijing, 100049, China.
Sci China Life Sci. 2018 Jan;61(1):68-78. doi: 10.1007/s11427-016-9045-7. Epub 2017 Aug 8.
Humans have been exposed to many environmental challenges since their evolutionary origins in Africa and subsequent migrations to the rest of the world. A severe environmental challenge to human migrants was hypoxia caused by low barometric oxygen pressure at high altitudes. Several genome-wide scans have elucidated the genetic basis of human high-altitude adaptations. However, the dearth of functional variant information has led to the successful association of only a few candidate genes. In the present study, we employed a candidate gene approach and re-sequenced the EDAR locus in 45 Tibetan individuals to identify mutations involved in hypoxia adaptation. We identified 10 and five quantitative trait-associated mutations for oxygen saturation (SaO) and blood platelet count, respectively, at the EDAR locus. Among these, rs10865026 and rs3749110 (associated with SaO and platelet count, respectively) were identified as functional candidate targets. These data demonstrate that EDAR has undergone natural selection in recent human history and indicate an important role of EDAR variants in Tibetan high-altitude adaptations.
自从人类在非洲起源并随后迁徙到世界其他地区以来,他们一直面临着许多环境挑战。人类迁徙者面临的一个严重的环境挑战是由于高海拔地区气压低导致的缺氧。几项全基因组扫描已经阐明了人类适应高海拔的遗传基础。然而,由于缺乏功能变异信息,只有少数候选基因能够成功关联。在本研究中,我们采用候选基因方法对 45 名藏族个体的 EDAR 基因座进行了重测序,以鉴定参与缺氧适应的突变。我们在 EDAR 基因座上发现了 10 个和 5 个与氧饱和度(SaO)和血小板计数相关的数量性状关联突变。其中,rs10865026 和 rs3749110(分别与 SaO 和血小板计数相关)被鉴定为功能候选靶点。这些数据表明,EDAR 在人类近代历史上经历了自然选择,表明 EDAR 变异在藏族人适应高海拔环境方面发挥了重要作用。