• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

液滴中柔性高分子的充电和释放机制。

Charging and Release Mechanisms of Flexible Macromolecules in Droplets.

机构信息

Department of Chemistry, The University of Western Ontario, London, ON, N6A 5B7, Canada.

出版信息

J Am Soc Mass Spectrom. 2017 Nov;28(11):2262-2279. doi: 10.1007/s13361-017-1754-4. Epub 2017 Aug 11.

DOI:10.1007/s13361-017-1754-4
PMID:28801879
Abstract

We study systematically the charging and release mechanisms of a flexible macromolecule, modeled by poly(ethylene glycol) (PEG), in a droplet by using molecular dynamics simulations. We compare how PEG is solvated and charged by sodium Na ions in a droplet of water (HO), acetonitrile (MeCN), and their mixtures. Initially, we examine the location and the conformation of the macromolecule in a droplet bearing no net charge. It is revealed that the presence of charge carriers do not affect the location of PEG in aqueous and MeCN droplets compared with that in the neutral droplets, but the location of the macromolecule and the droplet size do affect the PEG conformation. PEG is charged on the surface of a sodiated aqueous droplet that is found close to the Rayleigh limit. Its charging is coupled to the extrusion mechanism, where PEG segments leave the droplet once they coordinate a Na ion or in a correlated motion with Na ions. In contrast, as PEG resides in the interior of a MeCN droplet, it is sodiated inside the droplet. The compact macro-ion transitions through partially unwound states to an extended conformation, a process occurring during the final stage of desolvation and in the presence of only a handful of MeCN molecules. For charged HO/MeCN droplets, the sodiation of PEG is determined by the HO component, reflecting its slower evaporation and preference over MeCN for solvating Na ions. We use the simulation data to construct an analytical model that suggests that the droplet surface electric field may play a role in the macro-ion-droplet interactions that lead to the extrusion of the macro-ion. This study provides the first evidence of the effect of the surface electric field by using atomistic simulations. Graphical Abstract ᅟ.

摘要

我们通过分子动力学模拟系统地研究了柔性聚合物聚乙二醇(PEG)在液滴中的荷电和释放机制。我们比较了 PEG 在水(HO)、乙腈(MeCN)液滴及其混合物中被钠离子 Na 溶剂化和荷电的情况。首先,我们研究了在不带净电荷的液滴中大分子的位置和构象。结果表明,与中性液滴相比,电荷载体的存在并不影响 PEG 在水相和 MeCN 液滴中的位置,但大分子的位置和液滴的大小确实会影响 PEG 的构象。PEG 在靠近瑞利极限的带正电荷的水合钠离子液滴表面荷电。它的荷电与挤出机制有关,其中 PEG 片段一旦与 Na 离子配位或与 Na 离子协同运动,就会离开液滴。相比之下,由于 PEG 存在于 MeCN 液滴的内部,它在液滴内部被钠化。致密的大分子离子通过部分展开状态过渡到伸展构象,这一过程发生在去溶剂化的最后阶段,并且只有少量的 MeCN 分子存在。对于带电荷的 HO/MeCN 液滴,PEG 的钠化取决于 HO 成分,这反映了其蒸发速度较慢,并且比 MeCN 更倾向于溶剂化 Na 离子。我们使用模拟数据构建了一个分析模型,该模型表明液滴表面电场可能在导致大分子离子挤出的大分子-液滴相互作用中发挥作用。这项研究首次通过原子模拟提供了表面电场影响的证据。

相似文献

1
Charging and Release Mechanisms of Flexible Macromolecules in Droplets.液滴中柔性高分子的充电和释放机制。
J Am Soc Mass Spectrom. 2017 Nov;28(11):2262-2279. doi: 10.1007/s13361-017-1754-4. Epub 2017 Aug 11.
2
Effect of solvent on the charging mechanisms of poly(ethylene glycol) in droplets.溶剂对液滴中聚乙二醇充电机制的影响。
J Chem Phys. 2015 Mar 21;142(11):114307. doi: 10.1063/1.4914923.
3
Effect of counterions on the charging mechanisms of a macromolecule in aqueous nanodrops.抗衡离子对水相纳米液滴中大分子带电机制的影响。
J Chem Phys. 2014 Sep 14;141(10):104321. doi: 10.1063/1.4894847.
4
Limitations of Atomistic Molecular Dynamics to Reveal Ejection of Proteins from Charged Nanodroplets.原子分子动力学揭示带电纳滴中蛋白质排出的局限性。
J Phys Chem B. 2023 Jun 1;127(21):4829-4842. doi: 10.1021/acs.jpcb.3c01313. Epub 2023 May 22.
5
Charge-induced conformational changes of PEG-(Na(+))(n) in a vacuum and aqueous nanodroplets.在真空中和水纳米液滴中,PEG-(Na(+))(n) 的电荷诱导构象变化。
J Phys Chem B. 2011 Sep 8;115(35):10447-55. doi: 10.1021/jp204559y. Epub 2011 Aug 12.
6
Release mechanisms of poly(ethylene glycol) macroions from aqueous charged nanodroplets.聚乙二醇大分子从带电荷的纳米液滴中释放的机制。
J Phys Chem B. 2012 May 17;116(19):5777-85. doi: 10.1021/jp301577b. Epub 2012 May 7.
7
Chain Ejection Model for Electrospray Ionization of Unfolded Proteins: Evidence from Atomistic Simulations and Ion Mobility Spectrometry.无折叠蛋白质电喷雾电离的链喷射模型:来自原子模拟和离子淌度谱的证据。
Anal Chem. 2018 Aug 21;90(16):10069-10077. doi: 10.1021/acs.analchem.8b02926. Epub 2018 Aug 8.
8
Classification of the ejection mechanisms of charged macromolecules from liquid droplets.荷电大分子从液滴中射出的机制分类。
J Chem Phys. 2013 Jan 28;138(4):044314. doi: 10.1063/1.4789018.
9
Electrospray Ionization of Polypropylene Glycol: Rayleigh-Charged Droplets, Competing Pathways, and Charge State-Dependent Conformations.聚乙二醇的电喷雾电离:瑞利荷电液滴、竞争途径和荷电状态依赖构象。
Anal Chem. 2018 Aug 21;90(16):9912-9920. doi: 10.1021/acs.analchem.8b02115. Epub 2018 Aug 1.
10
Molecular Dynamics simulations of the electrospray process: formation of NaCl clusters via the charged residue mechanism.电喷雾过程的分子动力学模拟:通过带电残基机制形成氯化钠簇。
J Phys Chem B. 2014 Oct 16;118(41):12025-33. doi: 10.1021/jp507635y. Epub 2014 Oct 2.

引用本文的文献

1
Strengths and Weaknesses of Molecular Simulations of Electrosprayed Droplets.喷雾液滴的分子模拟的优势与不足。
J Am Soc Mass Spectrom. 2018 Dec;29(12):2287-2296. doi: 10.1007/s13361-018-2039-2. Epub 2018 Sep 26.

本文引用的文献

1
Characterization of "Star" Droplet Morphologies Induced by Charged Macromolecules.带电大分子诱导的“星型”液滴形态的表征
J Phys Chem A. 2016 Nov 10;120(44):8871-8880. doi: 10.1021/acs.jpca.6b08486. Epub 2016 Oct 31.
2
The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin.用于蛋白质的OPLS(液体模拟优化势)势函数、环肽和克拉宾晶体的能量最小化。
J Am Chem Soc. 1988 Mar 1;110(6):1657-66. doi: 10.1021/ja00214a001.
3
Crystal structure of an invertebrate cytolysin pore reveals unique properties and mechanism of assembly.
无脊椎动物细胞溶解素孔的晶体结构揭示了其独特的性质和组装机制。
Nat Commun. 2016 May 12;7:11598. doi: 10.1038/ncomms11598.
4
Insights into Eukaryotic Translation Initiation from Mass Spectrometry of Macromolecular Protein Assemblies.从大分子蛋白质组装体的质谱分析洞察真核生物翻译起始过程
J Mol Biol. 2016 Jan 29;428(2 Pt A):344-356. doi: 10.1016/j.jmb.2015.10.011. Epub 2015 Oct 21.
5
How do non-covalent complexes dissociate in droplets? A case study of the desolvation of dsDNA from a charged aqueous nanodrop.非共价复合物如何在液滴中解离?以带电荷的水性纳米液滴中双链DNA的去溶剂化为例的研究。
Phys Chem Chem Phys. 2015 Oct 14;17(38):25550-62. doi: 10.1039/c5cp04331j.
6
Effect of solvent on the charging mechanisms of poly(ethylene glycol) in droplets.溶剂对液滴中聚乙二醇充电机制的影响。
J Chem Phys. 2015 Mar 21;142(11):114307. doi: 10.1063/1.4914923.
7
Kinetics of polymer looping with macromolecular crowding: effects of volume fraction and crowder size.大分子拥挤条件下聚合物成环动力学:体积分数和拥挤剂尺寸的影响
Soft Matter. 2015 Jan 21;11(3):472-88. doi: 10.1039/c4sm02007c.
8
Effect of counterions on the charging mechanisms of a macromolecule in aqueous nanodrops.抗衡离子对水相纳米液滴中大分子带电机制的影响。
J Chem Phys. 2014 Sep 14;141(10):104321. doi: 10.1063/1.4894847.
9
What protein charging (and supercharging) reveal about the mechanism of electrospray ionization.蛋白质电荷化(以及超电荷化)揭示了电喷雾电离的机制。
J Am Soc Mass Spectrom. 2014 Oct;25(10):1675-93. doi: 10.1007/s13361-014-0965-1. Epub 2014 Aug 19.
10
Charge enhancement of single-stranded DNA in negative electrospray ionization using the supercharging reagent meta-nitrobenzyl alcohol.采用超荷试剂间硝基苄醇增强负电喷雾电离中单链 DNA 的荷质比。
J Am Soc Mass Spectrom. 2013 Dec;24(12):1988-96. doi: 10.1007/s13361-013-0732-8. Epub 2013 Sep 13.