Suppr超能文献

光异构化、能量存储与电荷分离:视觉色素和细菌视紫红质中光能转导的一个模型

Photoisomerization, energy storage, and charge separation: a model for light energy transduction in visual pigments and bacteriorhodopsin.

作者信息

Honig B, Ebrey T, Callender R H, Dinur U, Ottolenghi M

出版信息

Proc Natl Acad Sci U S A. 1979 Jun;76(6):2503-7. doi: 10.1073/pnas.76.6.2503.

Abstract

A simple model for the early events in visual pigments and bacteriorhodopsin is proposed. The model makes use of the likelihood that a negatively charged amino acid forms a salt bridge with the positively charged nitrogen of the retinylic chromophore. The photochemical event is a cis-trans isomerization in visual pigments and a trans-cis isomerization in bacteriorhodopsin, which in each case cleaves the salt bridge and thus separates charge in the interior of the protein. We propose that this is how the energy of a photon is transduced into chemical free energy of the primary photoproduct. The use of photoisomerization of a flexible chromophore to achieve charge separation provides a general mechanism which may be applicable to other systems. Our model explains many of the fundamental properties of visual pigments and their photoproducts. First, the extraordinarily low rate of thermally populating the ground state of the primary photoproduct, as determined from psychophysical and electrophysiological measurements, is seen as resulting from the large barrier to thermal isomerization about a double bond, perhaps enhanced by electrostatic attraction in the salt bridge. Second, the increase in energy and the spectral red shift that characterize the primary photochemical events are natural consequences of the separation of charge. Proton-dependent processes detected with picosecond techniques are proposed to be ground-state relaxation processes following the primary photochemical event. Finally, the charged groups of the salt bridge, repositioned by photoisomerization, provide a simple mechanism for vectorial proton translocation in bacteriorhodopsin.

摘要

提出了一个关于视觉色素和细菌视紫红质早期事件的简单模型。该模型利用了一个带负电荷的氨基酸与视黄醛发色团带正电荷的氮形成盐桥的可能性。光化学事件在视觉色素中是顺 - 反异构化,在细菌视紫红质中是反 - 顺异构化,在每种情况下都会切断盐桥,从而在蛋白质内部实现电荷分离。我们认为,光子的能量就是这样转化为初级光产物的化学自由能的。利用柔性发色团的光异构化来实现电荷分离提供了一种可能适用于其他系统的通用机制。我们的模型解释了视觉色素及其光产物的许多基本特性。首先,根据心理物理学和电生理学测量确定的初级光产物基态热填充的极低速率,被认为是由于围绕双键的热异构化存在很大障碍,可能还因盐桥中的静电吸引而增强。其次,表征初级光化学事件的能量增加和光谱红移是电荷分离的自然结果。用皮秒技术检测到的质子依赖过程被认为是初级光化学事件后的基态弛豫过程。最后,通过光异构化重新定位的盐桥带电基团为细菌视紫红质中的矢量质子转运提供了一种简单机制。

相似文献

2
Charge stabilization mechanism in the visual and purple membrane pigments.
Proc Natl Acad Sci U S A. 1978 Jun;75(6):2558-62. doi: 10.1073/pnas.75.6.2558.
3
Light isomerizes the chromophore of bacteriorhodopsin.
Nature. 1980 Sep 25;287(5780):351-3. doi: 10.1038/287351a0.
4
The nature of the primary photochemical events in rhodopsin and isorhodopsin.
Biophys J. 1988 Mar;53(3):367-85. doi: 10.1016/S0006-3495(88)83114-X.
6
The molecular mechanism of excitation in visual transduction and bacteriorhodopsin.
Proc Natl Acad Sci U S A. 1978 Feb;75(2):549-53. doi: 10.1073/pnas.75.2.549.
7
Primary photophysical and photochemical processes in visual excitation.
Biophys Struct Mech. 1977 Jun 29;3(2):97-100. doi: 10.1007/BF00535800.
8
9
The retinal chromophore/chloride ion pair: structure of the photoisomerization path and interplay of charge transfer and covalent states.
Proc Natl Acad Sci U S A. 2005 May 3;102(18):6255-60. doi: 10.1073/pnas.0408723102. Epub 2005 Apr 26.

引用本文的文献

1
Origin of the low thermal isomerization rate of rhodopsin chromophore.
Sci Rep. 2015 Jun 10;5:11081. doi: 10.1038/srep11081.
2
Light-controlled spin filtering in bacteriorhodopsin.
Nano Lett. 2015 Feb 11;15(2):1052-6. doi: 10.1021/nl503961p. Epub 2015 Jan 28.
3
Directed evolution of a far-red fluorescent rhodopsin.
Proc Natl Acad Sci U S A. 2014 Sep 9;111(36):13034-9. doi: 10.1073/pnas.1413987111. Epub 2014 Aug 25.
4
Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.
Chem Rev. 2014 Jan 8;114(1):126-63. doi: 10.1021/cr4003769. Epub 2013 Dec 23.
6
Primary processes in photolysis of octopus rhodopsin.
Biophys J. 1988 Jan;53(1):17-24. doi: 10.1016/S0006-3495(88)83061-3.
7
The effect of protonation and electrical interactions on the stereochemistry of retinal schiff bases.
Biophys J. 1985 Mar;47(3):415-30. doi: 10.1016/S0006-3495(85)83933-3.
8
Determination of retinal Schiff base configuration in bacteriorhodopsin.
Proc Natl Acad Sci U S A. 1984 Apr;81(7):2055-9. doi: 10.1073/pnas.81.7.2055.
9
Charged amino acids as spectroscopic determinants for chlorophyll in vivo.
Proc Natl Acad Sci U S A. 1983 Aug;80(16):4959-62. doi: 10.1073/pnas.80.16.4959.
10
On the molecular mechanisms of the Schiff base deprotonation during the bacteriorhodopsin photocycle.
Proc Natl Acad Sci U S A. 1986 Nov;83(22):8580-4. doi: 10.1073/pnas.83.22.8580.

本文引用的文献

1
THE ACTION OF LIGHT ON RHODOPSIN.
Proc Natl Acad Sci U S A. 1958 Feb;44(2):130-9. doi: 10.1073/pnas.44.2.130.
2
Pre-lumirhodopsin and the bleaching of visual pigments.
Nature. 1963 Mar 30;197:1279-86. doi: 10.1038/1971279a0.
3
The stereoisomerization of 11-cis-retinal.
J Biol Chem. 1966 Apr 25;241(8):1814-8.
4
The chemistry of visual photoreception.
Cold Spring Harb Symp Quant Biol. 1965;30:301-15. doi: 10.1101/sqb.1965.030.01.032.
5
Formation and decay of prelumirhodopsin at room temperatures.
Proc Natl Acad Sci U S A. 1972 Oct;69(10):2802-6. doi: 10.1073/pnas.69.10.2802.
6
Resonance Raman spectroscopy of rhodopsin in retinal disk membranes.
Biochemistry. 1974 Sep 24;13(20):4243-8. doi: 10.1021/bi00717a027.
7
Bicycle-pedal model for the first step in the vision process.
Nature. 1976 Apr 22;260(5553):679-83. doi: 10.1038/260679a0.
9
Is proton transfer the initial photochemical process in vision?
Nature. 1976 Nov 4;264(5581):92-4. doi: 10.1038/264092a0.
10
Photochemical reaction of bacteriorhodopsin.
FEBS Lett. 1976 Dec 15;72(1):33-8. doi: 10.1016/0014-5793(76)80807-1.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验