• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

醛缩酶的副催化修饰:催化循环的一个副反应,导致两个活性位点赖氨酸残基的不可逆阻断。

Paracatalytic modification of aldolase: a side reaction of the catalytic cycle resulting in irreversible blocking of two active-site lysyl residues.

作者信息

Lubini D G, Christen P

出版信息

Proc Natl Acad Sci U S A. 1979 Jun;76(6):2527-31. doi: 10.1073/pnas.76.6.2527.

DOI:10.1073/pnas.76.6.2527
PMID:288042
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC383640/
Abstract

Paracatalytic enzyme modifications result from the oxidation of enzyme-substrate carbanions by extrinsic oxidants. During the oxidation of enzyme-activated substrates, transiently reactive intermediates are generated which, without being released from the enzyme, modify groups at the active site. For enzymes producing carbanion intermediates, the combination of the normal substrate with a suitable electron acceptor has thus been proposed as a highly specific binary system for their active site-directed modification. In this study, the structural features of paracatalytically modified fructose-1,6-bisphosphate aldolase (D-fructose-1,6-bisphosphate D-glyceraldehyde-3-phosphate lyase, EC 4.1.2.13) from rabbit muscle have been elucidated. This enzyme is completely inactivated within 60 min in the presence of fructose 1,6-bisphosphate in saturating concentration and 0.5 mM hexacyanoferrate(III) (pH 7.6, 25 degrees C). The inactivation is caused by covalent incorporation of one triosephosphate derivative per subunit. Peptide analysis showed that the triosephosphate derivative forms an intrachain crosslink between lysine-146 and lysine-227. According to previous independent experimental evidence, both lysyl residues are located at the active site: the epsilon-amino group of lysine-227 forms a Schiff base intermediate with the carbonyl group of the substrate [Lai, C. Y., Nakai, N. & Chang, D. (1974) Science 183, 1204-1206] and alkylation of lysine-146 by the affinity labeling reagent N-bromoacetylethanolamine phosphate inactivates the enzyme [Hartman, F. C. & Brown, J. P. (1976) J. Biol. Chem. 251, 3057-3062]. The present data thus establish paracatalytic modification as a mode of active site-directed enzyme modification.

摘要

副催化酶修饰是由外在氧化剂氧化酶 - 底物碳负离子引起的。在酶激活的底物氧化过程中,会产生瞬态反应性中间体,这些中间体在不释放到酶外的情况下修饰活性位点的基团。因此,对于产生碳负离子中间体的酶,正常底物与合适电子受体的组合被提议作为一种用于其活性位点定向修饰的高度特异性二元体系。在本研究中,已阐明了来自兔肌肉的经副催化修饰的果糖 -1,6- 二磷酸醛缩酶(D- 果糖 -1,6- 二磷酸 D- 甘油醛 -3- 磷酸裂解酶,EC 4.1.2.13)的结构特征。在饱和浓度的果糖 1,6- 二磷酸和 0.5 mM 高铁氰化物(III)(pH 7.6,25℃)存在下,该酶在 60 分钟内完全失活。失活是由每个亚基共价掺入一个磷酸丙糖衍生物引起的。肽分析表明,磷酸丙糖衍生物在赖氨酸 -146 和赖氨酸 -227 之间形成链内交联。根据先前独立的实验证据,两个赖氨酰残基都位于活性位点:赖氨酸 -227 的 ε- 氨基与底物的羰基形成席夫碱中间体 [赖,C.Y.,中井,N. 和张,D.(1974 年)《科学》183,1204 - 1206],并且亲和标记试剂 N- 溴乙酰乙醇胺磷酸对赖氨酸 -146 的烷基化使酶失活 [哈特曼,F.C. 和布朗,J.P.(1976 年)《生物化学杂志》251,3057 - 3062]。因此,目前的数据确立了副催化修饰作为一种活性位点定向酶修饰的模式。

相似文献

1
Paracatalytic modification of aldolase: a side reaction of the catalytic cycle resulting in irreversible blocking of two active-site lysyl residues.醛缩酶的副催化修饰:催化循环的一个副反应,导致两个活性位点赖氨酸残基的不可逆阻断。
Proc Natl Acad Sci U S A. 1979 Jun;76(6):2527-31. doi: 10.1073/pnas.76.6.2527.
2
Paracatalytic self-inactivation of fructose-1,6-bisphosphate aldolase. Structure of the crosslink formed at the active site.
Eur J Biochem. 1993 Jun 1;214(2):515-9. doi: 10.1111/j.1432-1033.1993.tb17949.x.
3
Affinity labeling of a previously undetected essential lysyl residue in class I fructose bisphosphate aldolase.对I类果糖二磷酸醛缩酶中一个先前未被检测到的必需赖氨酰残基进行亲和标记。
J Biol Chem. 1976 May 25;251(10):3057-62.
4
Affinity labeling of rabbit muscle fructose-1,6-bisphosphate aldolase with 5'-[p-(fluorosulfonyl)benzoyl]-1,N6-ethenoadenosine.
Eur J Biochem. 1985 Jan 15;146(2):309-14. doi: 10.1111/j.1432-1033.1985.tb08654.x.
5
Site-directed mutagenesis identifies aspartate 33 as a previously unidentified critical residue in the catalytic mechanism of rabbit aldolase A.定点诱变确定天冬氨酸33是兔醛缩酶A催化机制中一个先前未被识别的关键残基。
J Biol Chem. 1993 Jan 15;268(2):1095-100.
6
A lysine to arginine substitution at position 146 of rabbit aldolase A changes the rate-determining step to Schiff base formation.兔醛缩酶A第146位赖氨酸替换为精氨酸,会使决定反应速率的步骤转变为席夫碱的形成。
Protein Eng. 1996 Jan;9(1):61-7. doi: 10.1093/protein/9.1.61.
7
Specific irreversible inhibition of enzymes concomitant to the oxidation of carbanionic enzyme-substrate intermediates by hexacyanoferrate (III).
Eur J Biochem. 1976 Mar 16;63(1):223-31. doi: 10.1111/j.1432-1033.1976.tb10224.x.
8
Lysine-146 of rabbit muscle aldolase is essential for cleavage and condensation of the C3-C4 bond of fructose 1,6-bis(phosphate).兔肌肉醛缩酶的赖氨酸-146对于1,6-二磷酸果糖C3-C4键的裂解和缩合至关重要。
Biochemistry. 1994 Oct 11;33(40):12291-7. doi: 10.1021/bi00206a036.
9
Structure of a fructose-1,6-bis(phosphate) aldolase liganded to its natural substrate in a cleavage-defective mutant at 2.3 A(,).在一个裂解缺陷型突变体中与天然底物结合的1,6-二磷酸果糖醛缩酶的结构,分辨率为2.3埃。
Biochemistry. 1999 Sep 28;38(39):12655-64. doi: 10.1021/bi9828371.
10
Photoaffinity labeling of rabbit muscle fructose-1,6-bisphosphate aldolase with 8-azido-1,N6-ethenoadenosine 5'-triphosphate.用8-叠氮基-1,N6-乙烯基腺苷5'-三磷酸对兔肌肉果糖-1,6-二磷酸醛缩酶进行光亲和标记。
Biochemistry. 1987 Jun 16;26(12):3466-71. doi: 10.1021/bi00386a033.

引用本文的文献

1
The Moderately (D)efficient Enzyme: Catalysis-Related Damage and Its Repair.中度(D)有效酶:与催化相关的损伤及其修复。
Biochemistry. 2021 Nov 30;60(47):3555-3565. doi: 10.1021/acs.biochem.1c00613. Epub 2021 Nov 3.
2
The number of catalytic cycles in an enzyme's lifetime and why it matters to metabolic engineering.酶的寿命中的催化循环数及其对代谢工程的意义。
Proc Natl Acad Sci U S A. 2021 Mar 30;118(13). doi: 10.1073/pnas.2023348118.
3
Proteomic determination of the lysine acetylome and phosphoproteome in the rat native inner medullary collecting duct.在大鼠天然内髓集合管中赖氨酸乙酰化组和磷酸化组的蛋白质组学测定。
Physiol Genomics. 2018 Sep 1;50(9):669-679. doi: 10.1152/physiolgenomics.00029.2018. Epub 2018 Jun 22.
4
A survey of oxidative paracatalytic reactions catalyzed by enzymes that generate carbanionic intermediates: implications for ROS production, cancer etiology, and neurodegenerative diseases.对由产生碳负离子中间体的酶催化的氧化副催化反应的调查:对活性氧生成、癌症病因学和神经退行性疾病的影响。
Adv Enzymol Relat Areas Mol Biol. 2011;77:307-60. doi: 10.1002/9780470920541.ch7.
5
Directed evolution of aldolases for exploitation in synthetic organic chemistry.用于合成有机化学的醛缩酶的定向进化
Arch Biochem Biophys. 2008 Jun 15;474(2):318-30. doi: 10.1016/j.abb.2008.01.005. Epub 2008 Jan 19.
6
Escherichia coli dihydroxyacetone kinase controls gene expression by binding to transcription factor DhaR.大肠杆菌二羟基丙酮激酶通过与转录因子DhaR结合来控制基因表达。
EMBO J. 2005 Jan 26;24(2):283-93. doi: 10.1038/sj.emboj.7600517. Epub 2004 Dec 16.
7
Aldolase A Ins(1,4,5)P3-binding domains as determined by site-directed mutagenesis.通过定点诱变确定的醛缩酶A肌醇-1,4,5-三磷酸结合结构域。
Biochem J. 1999 Aug 1;341 ( Pt 3)(Pt 3):805-12.
8
Molecular architecture of rabbit skeletal muscle aldolase at 2.7-A resolution.兔骨骼肌醛缩酶在2.7埃分辨率下的分子结构
Proc Natl Acad Sci U S A. 1987 Nov;84(22):7846-50. doi: 10.1073/pnas.84.22.7846.
9
The complete amino acid sequence of human skeletal-muscle fructose-bisphosphate aldolase.人类骨骼肌果糖二磷酸醛缩酶的完整氨基酸序列。
Biochem J. 1988 Feb 1;249(3):779-88. doi: 10.1042/bj2490779.
10
The predicted secondary structures of class I fructose-bisphosphate aldolases.I类果糖-1,6-二磷酸醛缩酶的预测二级结构。
Biochem J. 1988 Feb 1;249(3):789-93. doi: 10.1042/bj2490789.

本文引用的文献

1
Organic phosphate groups in native and borohydride-reduced aldolase.
Arch Biochem Biophys. 1966 Nov;117(2):437-44. doi: 10.1016/0003-9861(66)90433-4.
2
High recovery of tryptophan from acid hydrolysates of proteins.从蛋白质酸水解物中高效回收色氨酸。
Biochem Biophys Res Commun. 1969 Apr 29;35(2):175-81. doi: 10.1016/0006-291x(69)90263-0.
3
Reaction of the carbanionic aldolase-substrate intermediate with tetranitromethane. Identification of the products, hydroxypyruvaldehyde phosphate and D-5-ketofructose 1,6-diphosphate.
J Am Chem Soc. 1972 Nov 1;94(22):7911-6. doi: 10.1021/ja00777a039.
4
Identification of the histidyl residue of rabbit muscle aldolase alkylated by N-bromoacetylethanolamine phosphate.鉴定经磷酸-N-溴乙酰乙醇胺烷基化的兔肌肉醛缩酶的组氨酰残基。
Biochem Biophys Res Commun. 1974 Mar 15;57(1):85-92. doi: 10.1016/s0006-291x(74)80360-8.
5
H2O2 oxidizes an aldolase dihydroxyacetone phosphate intermediate to hydroxymethylglyoxal phosphate.过氧化氢将醛缩酶磷酸二羟丙酮中间体氧化为磷酸羟基甲基乙二醛。
Experientia. 1974 Jun 15;30(6):603-5. doi: 10.1007/BF01921497.
6
Amino acid sequence of rabbit muscle aldolase and the structure of the active center.
Science. 1974 Mar;183(130):1204-6. doi: 10.1126/science.183.4130.1204.
7
Inactivation of class I fructose diphosphate aldolases by the substrate analog N-bromoacetylethanolamine phosphate.底物类似物N-溴乙酰乙醇胺磷酸对I类果糖二磷酸醛缩酶的失活作用。
J Biol Chem. 1973 Dec 10;248(23):8233-9.
8
Mechanistic probes for enzymatic reactions. Oxidation-reduction indicators as oxidants of intermediary carbanions (studies with aldolase, aspartate aminotransferase, pyruvate decarboxylase, and 6-phosphogluconate dehydrogenase).
Biochemistry. 1973 Jan 2;12(1):35-41. doi: 10.1021/bi00725a006.
9
Arginine as the C-1 phosphate binding site in rabbit muscle aldolase.
FEBS Lett. 1975 Jun 1;54(1):70-2. doi: 10.1016/0014-5793(75)81070-2.
10
Specific irreversible inhibition of enzymes concomitant to the oxidation of carbanionic enzyme-substrate intermediates by hexacyanoferrate (III).
Eur J Biochem. 1976 Mar 16;63(1):223-31. doi: 10.1111/j.1432-1033.1976.tb10224.x.