Cardio-Renal Physiology and Medicine, Division of Nephrology, Department of Medicine, University of Alabama at Birmingham , Birmingham, Alabama.
Epithelial Systems Biology Laboratory, Systems Biology Center, National Heart, Lung, and Blood Institute, National Institutes of Health , Bethesda, Maryland.
Physiol Genomics. 2018 Sep 1;50(9):669-679. doi: 10.1152/physiolgenomics.00029.2018. Epub 2018 Jun 22.
Phosphorylation and lysine (K)-acetylation are dynamic posttranslational modifications of proteins. Previous proteomic studies have identified over 170,000 phosphorylation sites and 15,000 K-acetylation sites in mammals. We recently reported that the inner medullary collecting duct (IMCD), which functions in the regulation of water-reabsorption, via the actions of vasopressin, expresses many of the enzymes that can modulated K-acetylation. The purpose of this study was to determine the K-acetylated or phosphorylated proteins expressed in IMCD cells. Second we questioned whether vasopressin V2 receptor activation significantly affects the IMCD acetylome or phosphoproteome? K-acetylated or serine-, threonine-, or tyrosine-phosphorylated peptides were identified from native rat IMCDs by proteomic analysis with four different enzymes (trypsin, chymotrypsin, ASP-N, or Glu-C) to generate a high-resolution proteome. K-acetylation was identified in 431 unique proteins, and 64% of the K-acetylated sites were novel. The acetylated proteins were expressed in all compartments of the cell and were enriched in pathways including glycolysis and vasopressin-regulated water reabsorption. In the vasopressin-regulated water reabsorption pathway, eight proteins were acetylated, including the novel identification of the basolateral water channel, AQP3, acetylated at K282; 215 proteins were phosphorylated in this IMCD cohort, including AQP2 peptides that were phosphorylated at four serines: 256, 261, 264, and 269. Acute dDAVP did not significantly affect the IMCD acetylome; however, it did significantly affect previously known vasopressin-regulated phosphorylation sites. In conclusion, presence of K-acetylated proteins involved in metabolism, ion, and water transport in the IMCD points to multiple roles of K-acetylation beyond its canonical role in transcriptional regulation.
磷酸化和赖氨酸(K)乙酰化是蛋白质的动态翻译后修饰。以前的蛋白质组学研究已经在哺乳动物中鉴定出超过 170,000 个磷酸化位点和 15,000 个 K-乙酰化位点。我们最近报道说,通过血管加压素的作用,在调节水吸收方面起作用的内髓集合管(IMCD)表达了许多可以调节 K-乙酰化的酶。本研究的目的是确定在 IMCD 细胞中表达的 K-乙酰化或磷酸化蛋白质。其次,我们想知道血管加压素 V2 受体激活是否会显著影响 IMCD 的乙酰基组或磷酸蛋白质组?通过使用四种不同的酶(胰蛋白酶、糜蛋白酶、ASP-N 或 Glu-C)进行蛋白质组分析,从天然大鼠 IMCD 中鉴定出 K-乙酰化或丝氨酸、苏氨酸或酪氨酸磷酸化肽,以生成高分辨率蛋白质组。鉴定出 431 个独特的蛋白质发生 K-乙酰化,其中 64%的 K-乙酰化位点是新的。乙酰化蛋白在细胞的所有区室中表达,并富含糖酵解和血管加压素调节的水吸收等途径。在血管加压素调节的水吸收途径中,有 8 个蛋白质被乙酰化,包括基底外侧水通道 AQP3 的 K282 乙酰化,这是一个新的发现;在这个 IMCD 队列中,有 215 个蛋白质被磷酸化,包括 AQP2 肽在四个丝氨酸上磷酸化:256、261、264 和 269。急性 dDAVP 对 IMCD 的乙酰基组没有显著影响;然而,它确实显著影响了先前已知的血管加压素调节的磷酸化位点。总之,IMCD 中涉及代谢、离子和水转运的 K-乙酰化蛋白的存在表明 K-乙酰化除了在转录调节中的典型作用之外,还具有多种作用。