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内皮素 ET 受体与临床拮抗剂波生坦及其类似物结合的 X 射线结构。

X-ray structures of endothelin ET receptor bound to clinical antagonist bosentan and its analog.

机构信息

Department of Basic Medicinal Sciences, Graduate School of Pharmaceutical Sciences, Nagoya University, Nagoya, Japan.

Cellular and Structural Physiology Institute, Nagoya University, Nagoya, Japan.

出版信息

Nat Struct Mol Biol. 2017 Sep;24(9):758-764. doi: 10.1038/nsmb.3450. Epub 2017 Aug 14.

Abstract

Endothelin receptors (ETRs) have crucial roles in vascular control and are targets for drugs designed to treat circulatory-system diseases and cancer progression. The nonpeptide dual-ETR antagonist bosentan is the first oral drug approved to treat pulmonary arterial hypertension. Here we report crystal structures of human endothelin ET receptor bound to bosentan and to the ET-selective analog K-8794, at 3.6-Å and 2.2-Å resolution, respectively. The K-8794-bound structure reveals the detailed water-mediated hydrogen-bonding network at the transmembrane core, which could account for the weak negative allosteric modulation of ET by Na ions. The bosentan-bound structure reveals detailed interactions with ET, which are probably conserved in the ET receptor. A comparison of the two structures shows unexpected similarity between antagonist and agonist binding. Despite this similarity, bosentan sterically prevents the inward movement of transmembrane helix 6 (TM6), and thus exerts its antagonistic activity. These structural insights will facilitate the rational design of new ETR-targeting drugs.

摘要

内皮素受体 (ETRs) 在血管控制中起着至关重要的作用,是设计用于治疗循环系统疾病和癌症进展的药物的靶点。非肽类双重 ETR 拮抗剂波生坦是第一种被批准用于治疗肺动脉高压的口服药物。在这里,我们报告了与人内皮素 ET 受体结合的波生坦和 ET 选择性类似物 K-8794 的晶体结构,分辨率分别为 3.6-Å 和 2.2-Å。K-8794 结合结构揭示了跨膜核心中详细的水介导氢键网络,这可以解释 Na 离子对 ET 的弱负变构调节。波生坦结合结构揭示了与 ET 的详细相互作用,这些相互作用可能在 ET 受体中保守。对这两个结构的比较表明,拮抗剂和激动剂的结合具有出乎意料的相似性。尽管存在这种相似性,波生坦在空间上阻止了跨膜螺旋 6 (TM6) 的向内运动,从而发挥其拮抗活性。这些结构上的见解将有助于新的 ETR 靶向药物的合理设计。

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