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由细菌连接酶SdeA修饰的泛素链可免受去泛素化酶水解。

Ubiquitin Chains Modified by the Bacterial Ligase SdeA Are Protected from Deubiquitinase Hydrolysis.

作者信息

Puvar Kedar, Zhou Yiyang, Qiu Jiazhang, Luo Zhao-Qing, Wirth Mary J, Das Chittaranjan

机构信息

Department of Chemistry, Purdue University , 560 Oval Drive, West Lafayette, Indiana 47906, United States.

Purdue Institute of Immunology, Inflammation, and Infectious Diseases and Department of Biological Sciences, Purdue University , 915 West State Street, West Lafayette, Indiana 47906, United States.

出版信息

Biochemistry. 2017 Sep 12;56(36):4762-4766. doi: 10.1021/acs.biochem.7b00664. Epub 2017 Aug 18.

Abstract

The SidE family of Legionella pneumophila effectors is a unique group of ubiquitin-modifying enzymes. Along with catalyzing NAD-dependent ubiquitination of certain host proteins independent of the canonical E1/E2/E3 pathway, they have also been shown to produce phosphoribosylated free ubiquitin. This modified ubiquitin product is incompatible with conventional E1/E2/E3 ubiquitination processes, with the potential to lock down various cellular functions that are dependent on ubiquitin signaling. Here, we show that in addition to free ubiquitin, Lys63-, Lys48-, Lys11-, and Met1-linked diubiquitin chains are also modified by SdeA in a similar fashion. Both the proximal and distal ubiquitin moieties are targeted in the phosphoribosylation reaction. Furthermore, this renders the ubiquitin chains unable to be processed by a variety of deubiquitinating enzymes. These observations broaden the scope of SdeA's modulatory functions during Legionella infection.

摘要

嗜肺军团菌效应蛋白SidE家族是一类独特的泛素修饰酶。除了催化某些宿主蛋白的NAD依赖性泛素化反应(不依赖于经典的E1/E2/E3途径)外,它们还被证明能产生磷酸核糖基化的游离泛素。这种修饰后的泛素产物与传统的E1/E2/E3泛素化过程不兼容,有可能锁定各种依赖泛素信号传导的细胞功能。在这里,我们表明,除了游离泛素外,SdeA还以类似的方式修饰了赖氨酸63、赖氨酸48、赖氨酸11和蛋氨酸1连接的双泛素链。在磷酸核糖基化反应中,近端和远端泛素部分均被靶向修饰。此外,这使得泛素链无法被多种去泛素化酶加工处理。这些观察结果拓宽了SdeA在军团菌感染过程中调节功能的范围。

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本文引用的文献

1
A unique deubiquitinase that deconjugates phosphoribosyl-linked protein ubiquitination.
Cell Res. 2017 Jul;27(7):865-881. doi: 10.1038/cr.2017.66. Epub 2017 May 12.
2
A Single Legionella Effector Catalyzes a Multistep Ubiquitination Pathway to Rearrange Tubular Endoplasmic Reticulum for Replication.
Cell Host Microbe. 2017 Feb 8;21(2):169-181. doi: 10.1016/j.chom.2016.12.007. Epub 2016 Dec 29.
3
Phosphoribosylation of Ubiquitin Promotes Serine Ubiquitination and Impairs Conventional Ubiquitination.
Cell. 2016 Dec 1;167(6):1636-1649.e13. doi: 10.1016/j.cell.2016.11.019.
4
MINDY-1 Is a Member of an Evolutionarily Conserved and Structurally Distinct New Family of Deubiquitinating Enzymes.
Mol Cell. 2016 Jul 7;63(1):146-55. doi: 10.1016/j.molcel.2016.05.009. Epub 2016 Jun 9.
5
Ubiquitination independent of E1 and E2 enzymes by bacterial effectors.
Nature. 2016 May 5;533(7601):120-4. doi: 10.1038/nature17657. Epub 2016 Apr 6.
6
Substrate specificity of the ubiquitin and Ubl proteases.
Cell Res. 2016 Apr;26(4):441-56. doi: 10.1038/cr.2016.38. Epub 2016 Mar 25.
7
Structural basis of substrate recognition by a bacterial deubiquitinase important for dynamics of phagosome ubiquitination.
Proc Natl Acad Sci U S A. 2015 Dec 8;112(49):15090-5. doi: 10.1073/pnas.1514568112. Epub 2015 Nov 23.
8
Ubiquitin Ser65 phosphorylation affects ubiquitin structure, chain assembly and hydrolysis.
EMBO J. 2015 Feb 3;34(3):307-25. doi: 10.15252/embj.201489847. Epub 2014 Dec 19.

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