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古菌中两个Sac10b家族成员Mvo10b和Mth10bTQQA的主链和侧链H、N和C共振归属

Backbone and side-chain H, N and C resonance assignments of two Sac10b family members Mvo10b and Mth10bTQQA from archaea.

作者信息

Xuan Jinsong, Yao Hongwei, Feng Yingang, Wang Jinfeng

机构信息

Department of Biological Science and Engineering, School of Chemical and Biological Engineering, University of Science and Technology Beijing, 30 Xueyuan Road, Beijing, 100083, China.

High-Field Nuclear Magnetic Resonance Research Center, Xiamen University, 422 South Siming Road, Xiamen, 361005, Fujian, China.

出版信息

Biomol NMR Assign. 2017 Oct;11(2):269-273. doi: 10.1007/s12104-017-9761-8. Epub 2017 Aug 16.

Abstract

The Sac10b family proteins, also named as Alba, are small, basic, nucleic acid-binding proteins widely distributed in archaea. They possess divergent physiological functions such as binding to both DNA and RNA with a high affinity and involving in genomic DNA compaction, RNA transactions and transcriptional regulations. The structures of many Sac10b family proteins from hyperthermophilic archaea have been reported, while those from thermophilic and mesophilic archaea are largely unknown. As was pointed out, the homologous members from thermophilic and mesophilic archaea may have functions different from the hyperthermophilic members. Therefore, comparison of these homologous members can provide biophysical and structural insight into the functional diversity and thermal adaptation mechanism. The present work mainly focused on the NMR study of two Sac10b family members, Mvo10b and Mth10b, from the mesophilic and thermophilic archaea, respectively. To overcome the difficulties caused by the oligomerization and conformation heterogeneity of Mth10b, a M13T/L17Q/I20Q/P56A mutant Mth10b (Mth10bTQQA) was constructed and used together with Mvo10b for multi-dimensional NMR experiments. The resonance assignments of Mvo10b and Mth10bTQQA are reported for further structural determination which is a basis for understanding the functional diversity and their thermal adaption mechanisms.

摘要

Sac10b家族蛋白,也被称为Alba,是一类小型的、碱性的、核酸结合蛋白,广泛分布于古菌中。它们具有多种不同的生理功能,如以高亲和力结合DNA和RNA,并参与基因组DNA压缩、RNA事务和转录调控。许多来自嗜热古菌的Sac10b家族蛋白的结构已被报道,而来自嗜温和嗜热古菌的蛋白结构在很大程度上还不清楚。正如所指出的,来自嗜温和嗜热古菌的同源成员可能具有与嗜热成员不同的功能。因此,比较这些同源成员可以为功能多样性和热适应机制提供生物物理和结构方面的见解。目前的工作主要集中于分别对来自嗜温和嗜热古菌的两个Sac10b家族成员Mvo10b和Mth10b进行核磁共振研究。为了克服由Mth10b的寡聚化和构象异质性引起的困难,构建了一个M13T/L17Q/I20Q/P56A突变体Mth10b(Mth10bTQQA),并将其与Mvo10b一起用于多维核磁共振实验。报道了Mvo10b和Mth10bTQQA的共振归属,以便进一步进行结构测定,这是理解功能多样性及其热适应机制的基础。

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