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古菌 Sac10b 蛋白家族:功能迥异的保守蛋白

The archaeal Sac10b protein family: conserved proteins with divergent functions.

机构信息

Dept. of Biological Science and Engineering, School of Chemical and Biological Engineering, University of Science & Technology Beijing, 30 Xueyuan Road, Beijing 100083, China.

出版信息

Curr Protein Pept Sci. 2012 May;13(3):258-66. doi: 10.2174/138920312800785067.

Abstract

Here we review the present state of structural and functional studies of the Sac10b protein family, a class of highly conserved 10 kDa nucleic acid-binding proteins in archaea. Based on biochemical and structural studies, these proteins were originally assigned a role in the structural organization of chromatin; Sac10b proteins of hyperthermophilic archaea, for example, showed tight, unspecific DNA binding. More recently, however, Sac10b proteins of mesophilic archaea were found to interact preferentially with specific DNA sequences thereby affecting the expression of distinct genes. Furthermore, Sac10b proteins of hyperthermophilic, thermophilic and mesophilic archaea were also shown to bind to RNA with distinct affinities and specificities but functional consequences of RNA binding of these proteins, besides perhaps RNA stabilization, have not yet been observed. To better understand the physiological meaning of the various interactions of Sac10b proteins with nucleic acids, future work should concentrate on elucidating the molecular structures of complexes of Sac10b proteins of hyperthermophilic and mesophilic archaea with DNA and RNA. In addition, existing and new X-ray and NMR structures of individual hyperthermophilic Sac10b proteins may represent very good models for introducing thermostability especially in enzymes for industrial use.

摘要

在这里,我们回顾了 Sac10b 蛋白家族的结构和功能研究现状,该家族是一类在古菌中高度保守的 10 kDa 核酸结合蛋白。基于生化和结构研究,这些蛋白最初被认为在染色质的结构组织中发挥作用;例如,来自高温古菌的 Sac10b 蛋白表现出紧密、非特异性的 DNA 结合。然而,最近发现,来自中温古菌的 Sac10b 蛋白更倾向于与特定的 DNA 序列相互作用,从而影响不同基因的表达。此外,还发现来自高温、嗜热和中温古菌的 Sac10b 蛋白也能以不同的亲和力和特异性结合 RNA,但除了可能的 RNA 稳定作用外,这些蛋白的 RNA 结合的功能后果尚未被观察到。为了更好地理解 Sac10b 蛋白与核酸的各种相互作用的生理意义,未来的工作应集中于阐明与 DNA 和 RNA 结合的高温和中温古菌的 Sac10b 蛋白复合物的分子结构。此外,现有和新的单个高温嗜热 Sac10b 蛋白的 X 射线和 NMR 结构可能代表着引入耐热性的非常好的模型,特别是在用于工业用途的酶中。

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