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基于核磁共振氢氘交换揭示乳糖结合诱导人半乳糖凝集素产生相反的动力学变化

Lactose Binding Induces Opposing Dynamics Changes in Human Galectins Revealed by NMR-Based Hydrogen-Deuterium Exchange.

作者信息

Chien Chih-Ta Henry, Ho Meng-Ru, Lin Chung-Hung, Hsu Shang-Te Danny

机构信息

Institute of Biological Chemistry, Academia Sinica, Taipei 11529, Taiwan.

Department of Chemistry, National Taiwan University, Taipei 106, Taiwan.

出版信息

Molecules. 2017 Aug 16;22(8):1357. doi: 10.3390/molecules22081357.

Abstract

Galectins are β-galactoside-binding proteins implicated in a myriad of biological functions. Despite their highly conserved carbohydrate binding motifs with essentially identical structures, their affinities for lactose, a common galectin inhibitor, vary significantly. Here, we aimed to examine the molecular basis of differential lactose affinities amongst galectins using solution-based techniques. Consistent dissociation constants of lactose binding were derived from nuclear magnetic resonance (NMR) spectroscopy, intrinsic tryptophan fluorescence, isothermal titration calorimetry and bio-layer interferometry for human galectin-1 (hGal1), galectin-7 (hGal7), and the N-terminal and C-terminal domains of galectin-8 (hGal8 and hGal8, respectively). Furthermore, the dissociation rates of lactose binding were extracted from NMR lineshape analyses. Structural mapping of chemical shift perturbations revealed long-range perturbations upon lactose binding for hGal1 and hGal8. We further demonstrated using the NMR-based hydrogen-deuterium exchange (HDX) that lactose binding increases the exchange rates of residues located on the opposite side of the ligand-binding pocket for hGal1 and hGal8, indicative of allostery. Additionally, lactose binding induces significant stabilisation of hGal8 across the entire domain. Our results suggested that lactose binding reduced the internal dynamics of hGal8 on a very slow timescale (minutes and slower) at the expense of reduced binding affinity due to the unfavourable loss of conformational entropy.

摘要

半乳糖凝集素是一类β-半乳糖苷结合蛋白,参与众多生物学功能。尽管它们具有高度保守且结构基本相同的碳水化合物结合基序,但它们对常见的半乳糖凝集素抑制剂乳糖的亲和力却有显著差异。在此,我们旨在使用基于溶液的技术研究半乳糖凝集素之间乳糖亲和力差异的分子基础。通过核磁共振(NMR)光谱、色氨酸固有荧光、等温滴定量热法和生物层干涉术,得出了人半乳糖凝集素-1(hGal1)、半乳糖凝集素-7(hGal7)以及半乳糖凝集素-8的N端和C端结构域(分别为hGal8N和hGal8C)与乳糖结合的一致解离常数。此外,从NMR线形分析中提取了乳糖结合的解离速率。化学位移扰动的结构图谱显示,hGal1和hGal8在乳糖结合时存在长程扰动。我们还使用基于NMR的氢-氘交换(HDX)证明,乳糖结合增加了hGal1和hGal8配体结合口袋另一侧残基的交换速率,这表明存在别构效应。此外,乳糖结合会使hGal8在整个结构域上显著稳定。我们的结果表明,乳糖结合在非常慢的时间尺度(数分钟及更慢)上降低了hGal8的内部动力学,但代价是由于构象熵的不利损失导致结合亲和力降低。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2de3/6152064/21a57e1d327d/molecules-22-01357-g001.jpg

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