da Silva Michele Jorge, Pastina Maria Marta, de Souza Vander Fillipe, Schaffert Robert Eugene, Carneiro Pedro Crescêncio Souza, Noda Roberto Willians, Carneiro José Eustáquio de Souza, Damasceno Cynthia Maria Borges, Parrella Rafael Augusto da Costa
Departamento de Biologia Geral, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brasil.
Embrapa Milho e Sorgo, Sete Lagoas, Minas Gerais, Brasil.
PLoS One. 2017 Aug 17;12(8):e0183504. doi: 10.1371/journal.pone.0183504. eCollection 2017.
Sweet sorghum [Sorghum bicolor (L.) Moench] is a type of cultivated sorghum characterized by the accumulation of high levels of sugar in the stems and high biomass accumulation, making this crop an important feedstock for bioenergy production. Sweet sorghum breeding programs that focus on bioenergy have two main goals: to improve quantity and quality of sugars in the juicy stem and to increase fresh biomass productivity. Genetic diversity studies are very important for the success of a breeding program, especially in the early stages, where understanding the genetic relationship between accessions is essential to identify superior parents for the development of improved breeding lines. The objectives of this study were: to perform phenotypic and molecular characterization of 100 sweet sorghum accessions from the germplasm bank of the Embrapa Maize and Sorghum breeding program; to examine the relationship between the phenotypic and the molecular diversity matrices; and to infer about the population structure in the sweet sorghum accessions. Morphological and agro-industrial traits related to sugar and biomass production were used for phenotypic characterization, and single nucleotide polymorphisms (SNPs) were used for molecular diversity analysis. Both phenotypic and molecular characterizations revealed the existence of considerable genetic diversity among the 100 sweet sorghum accessions. The correlation between the phenotypic and the molecular diversity matrices was low (0.35), which is in agreement with the inconsistencies observed between the clusters formed by the phenotypic and the molecular diversity analyses. Furthermore, the clusters obtained by the molecular diversity analysis were more consistent with the genealogy and the historic background of the sweet sorghum accessions than the clusters obtained through the phenotypic diversity analysis. The low correlation observed between the molecular and the phenotypic diversity matrices highlights the complementarity between the molecular and the phenotypic characterization to assist a breeding program.
甜高粱[Sorghum bicolor (L.) Moench]是一种栽培高粱,其特点是茎中积累大量糖分且生物量积累高,使这种作物成为生物能源生产的重要原料。专注于生物能源的甜高粱育种计划有两个主要目标:提高多汁茎中糖分的数量和质量,以及提高新鲜生物量生产力。遗传多样性研究对于育种计划的成功非常重要,尤其是在早期阶段,了解种质之间的遗传关系对于识别优良亲本以培育改良品系至关重要。本研究的目的是:对来自巴西农牧业研究公司玉米和高粱育种计划种质库的100份甜高粱种质进行表型和分子特征分析;研究表型和分子多样性矩阵之间的关系;推断甜高粱种质的群体结构。与糖和生物量生产相关的形态和农艺性状用于表型特征分析,单核苷酸多态性(SNP)用于分子多样性分析。表型和分子特征分析均表明,100份甜高粱种质之间存在相当大的遗传多样性。表型和分子多样性矩阵之间的相关性较低(0.35),这与表型和分子多样性分析形成的聚类之间观察到的不一致性相符。此外,与通过表型多样性分析获得的聚类相比,通过分子多样性分析获得的聚类与甜高粱种质的系谱和历史背景更一致。分子和表型多样性矩阵之间观察到的低相关性突出了分子和表型特征分析在辅助育种计划方面的互补性。