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嗜热生物质降解真菌FCH 10.5的基因组序列

Genome Sequence of the Thermophilic Biomass-Degrading Fungus FCH 10.5.

作者信息

Granchi Zoraide, van Pelt Sake, Thanh Vu Nguyen, Olsson Lisbeth, Hüttner Silvia

机构信息

GenomeScan B.V., Leiden, The Netherlands.

Center for Industrial Microbiology, Food Industries Research Institute, Thanh Xuan, Hanoi, Vietnam.

出版信息

Genome Announc. 2017 Aug 17;5(33):e00779-17. doi: 10.1128/genomeA.00779-17.

DOI:10.1128/genomeA.00779-17
PMID:28818895
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5604768/
Abstract

We report here the annotated draft genome sequence of the thermophilic biomass-degrading fungus strain FCH 10.5, isolated from compost at a waste treatment plant in Vietnam. The genome sequence contains 24.96 Mb with an overall GC content of 49.79% and comprises 9,437 protein-coding genes.

摘要

我们在此报告嗜热生物质降解真菌菌株FCH 10.5的注释基因组序列草图，该菌株是从越南一家废物处理厂的堆肥中分离出来的。基因组序列包含2496万个碱基对，总体GC含量为49.79%，由9437个蛋白质编码基因组成。

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Appl Environ Microbiol. 2019 Nov 14;85(23). doi: 10.1128/AEM.01408-19. Print 2019 Dec 1.

本文引用的文献

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CodingQuarry: highly accurate hidden Markov model gene prediction in fungal genomes using RNA-seq transcripts.CodingQuarry：利用RNA测序转录本对真菌基因组进行高精度隐马尔可夫模型基因预测。
BMC Genomics. 2015 Mar 11;16(1):170. doi: 10.1186/s12864-015-1344-4.
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Purification and characterization of a novel alkaline β-1,3-1,4-glucanase (lichenase) from thermophilic fungus Malbranchea cinnamomea.从嗜热真菌 Malbranchea cinnamomea 中纯化和表征一种新型碱性 β-1,3-1,4-葡聚糖酶（lichenase）。
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