Gao Jun-Lian, Sun Pengbo, Wang Xu-Ming, Lv Fan-Yang, Mao Xiao-Jie, Sun Jian-Guang
Beijing Agro- Biotechnology Research Center, Beijing Academy of Agriculture and Forestry/Beijing Municipal Key Laboratory of Agricultural Gene Resources and Biotechnology, Beijing 100097, PR China.
State Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing 100091, PR China.
Int J Syst Evol Microbiol. 2017 Aug;67(8):2798-2803. doi: 10.1099/ijsem.0.002025. Epub 2017 Aug 18.
A novel Gram-stain-negative, aerobic, rod-shaped strain designated 166T was isolated from surface-sterilized root tissue of maize planted in the Fangshan District of Beijing, PR China. The 16S rRNA gene sequence analysis indicated that strain 166T belongs to the genus Rhizobium and is closely related to Rhizobium cellulosilyticum ALA10B2T and Rhizobium yantingense H66T with sequence similarities of 98.8 and 98.3 %, respectively. According to atpD and recA sequence analysis, the highest sequence similarity between strain 166T and R. cellulosilyticum ALA10B2T is 93.8 and 84.7 %, respectively. However, the new isolate exhibited relatively low levels of DNA-DNA relatedness with respect to R. cellulosilyticum DSM 18291T (20.8±2.3 %) and Rhizobium yantingense CCTCC AB 2014007T (47.2±1.4 %). The DNA G+C content of strain 166T was 59.8 mol%. The main polar lipids consisted of phosphatidylethanolamine, phosphatidylglycerol, phosphatidylcholine, diphosphatidylglycerol, an unidentified aminophospholipid and an unidentified aminolipid. The major fatty acids of strain 166T were summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c). The results of the physiological and biochemical tests and minor differences in the fatty acid profiles allowed a clear phenotypic differentiation of strain 166T from the type strains of closely related species, R. cellulosilyticum DSM 18291T and R. yantingense CCTCC AB 2014007T. Strain 166T represents a novel species within the genus Rhizobium, for which the name Rhizobium wenxiniae sp. nov. is proposed, with the type strain 166T (=CGMCC 1.15279T=DSM 100734T).
从中国北京房山区种植的玉米表面消毒根组织中分离出一株新的革兰氏阴性、需氧、杆状菌株,命名为166T。16S rRNA基因序列分析表明,菌株166T属于根瘤菌属,与纤维素分解根瘤菌ALA10B2T和盐亭根瘤菌H66T密切相关,序列相似性分别为98.8%和98.3%。根据atpD和recA序列分析,菌株166T与纤维素分解根瘤菌ALA10B2T的最高序列相似性分别为93.8%和84.7%。然而,新分离株与纤维素分解根瘤菌DSM 18291T(20.8±2.3%)和盐亭根瘤菌CCTCC AB 2014007T(47.2±1.4%)的DNA-DNA相关性相对较低。菌株166T的DNA G+C含量为59.8 mol%。主要极性脂类包括磷脂酰乙醇胺、磷脂酰甘油、磷脂酰胆碱、二磷脂酰甘油、一种未鉴定的氨基磷脂和一种未鉴定的氨基脂。菌株166T的主要脂肪酸为总和特征8(C18:1ω7c和/或C18:1ω6c)。生理生化试验结果以及脂肪酸谱的微小差异使得菌株166T与密切相关物种的模式菌株纤维素分解根瘤菌DSM 18291T和盐亭根瘤菌CCTCC AB 2014007T能够进行明确的表型区分。菌株166T代表根瘤菌属内的一个新物种,为此提出新名称文心根瘤菌(Rhizobium wenxiniae sp. nov.),模式菌株为166T(=CGMCC 1.15279T=DSM 100734T)。