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利用简化基因组测序和形态学特征对杂交狗牙根[(L.)Pers.×Burtt-Davy]果岭中的异型禾本科杂草进行基因型和表型评估。

Genotypic and phenotypic evaluation of off-type grasses in hybrid Bermudagrass [ (L.) Pers. x Burtt-Davy] putting greens using genotyping-by-sequencing and morphological characterization.

作者信息

Reasor Eric H, Brosnan James T, Staton Margaret E, Lane Thomas, Trigiano Robert N, Wadl Phillip A, Conner Joann A, Schwartz Brian M

机构信息

Department of Plant and Soil Sciences, Mississippi State University, 117 Dorman Hall, 32 Creelman Street, Mississippi State University, Mississippi State, MS 39762 USA.

Department of Plant Sciences, University of Tennessee, 2431 Joe Johnson Dr., 252 Ellington Plant Sciences Bldg., Knoxville, TN 37996 USA.

出版信息

Hereditas. 2017 Aug 18;155:8. doi: 10.1186/s41065-017-0043-3. eCollection 2018.

Abstract

BACKGROUND

Interspecific hybrid bermudagrass [ (L.) Pers. x Burtt-Davy] is one of the most widely used grasses on golf courses, with cultivars derived from 'Tifgreen' or 'Tifdwarf' particularly used for putting greens. Many bermudagrass cultivars established for putting greens can be genetically unstable and lead to the occurrence of undesirable off-type grasses that vary in phenotype. The objective of this research was to genetically and phenotypically differentiate off-type grasses and hybrid cultivars. Beginning in 2013, off-type and desirable hybrid bermudagrass samples were collected from golf course putting greens in the southeastern United States and genetically and phenotypically characterized using genotyping-by-sequencing and morphology.

RESULTS

Genotyping-by-sequencing determined that 11% (5) of off-type and desirable samples from putting greens were genetically divergent from standard cultivars such as Champion, MiniVerde, Tifdwarf, TifEagle, and Tifgreen. In addition, genotyping-by-sequencing was unable to genetically distinguish all standard cultivars from one another due to their similar origin and clonal propagation; however, over 90,000 potentially informative nucleotide variants were identified among the triploid hybrid cultivars.

CONCLUSIONS

Although few genetic differences were found in this research, samples harvested from golf course putting greens had variable morphology and were clustered into three distinct phenotypic groups. The majority of off-type grasses in hybrid bermudagrass putting greens were genetically similar with variable morphological traits. Off-type grasses within golf course putting greens have the potential to compromise putting surface functionality and aesthetics.

摘要

背景

种间杂交狗牙根[(L.)Pers.×Burtt - Davy]是高尔夫球场上使用最广泛的草种之一,特别是源自“Tifgreen”或“Tifdwarf”的品种常用于果岭。许多用于果岭的狗牙根品种在遗传上可能不稳定,会导致出现表型各异的不良异型草。本研究的目的是从遗传和表型上区分异型草和杂交品种。从2013年开始,从美国东南部高尔夫球场果岭采集异型和优良杂交狗牙根样本,并通过简化基因组测序和形态学对其进行遗传和表型特征分析。

结果

简化基因组测序确定,来自果岭的11%(5个)异型和优良样本在遗传上与Champion、MiniVerde、Tifdwarf、TifEagle和Tifgreen等标准品种不同。此外,由于标准品种起源相似且通过克隆繁殖,简化基因组测序无法从遗传上区分所有标准品种;然而,在三倍体杂交品种中鉴定出了超过90,000个潜在的信息性核苷酸变异。

结论

尽管本研究中发现的遗传差异很少,但从高尔夫球场果岭采集的样本具有可变的形态,并聚类为三个不同的表型组。杂交狗牙根果岭中的大多数异型草在遗传上相似,但形态特征各异。高尔夫球场果岭内的异型草有可能损害果岭表面的功能和美观。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9092/5563029/cc3b8b2a0a5e/41065_2017_43_Fig1_HTML.jpg

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