Suresh G, Sailaja B, Ashif A, Dave Bharti P, Sasikala Ch, Ramana Ch V
Department of Plant Sciences, School of Life Sciences, University of Hyderabad, P.O.Central University, Hyderabad 500046, India.
Bacterial Discovery Laboratory, Centre for Environment, Institute of Science and Technology, J. N. T. University Hyderabad, Kukatpally, Hyderabad-500085, India.
Int J Syst Evol Microbiol. 2017 Sep;67(9):3289-3295. doi: 10.1099/ijsem.0.002107. Epub 2017 Aug 22.
Three strains (JA826T, JA912T and JA913), which were yellowish brown colour, rod to oval shaped, Gram-stain-negative, motile, phototrophic bacteria with a vesicular architecture of intracytoplasmic membranes, were isolated from different pond samples. The DNA G+C content of the three strains was between 64.6 and 65.5 mol%. The highest 16S rRNA gene sequence similarity of all three strains was with the type strains of the genus Rhodobacter sensu stricto in the family Rhodobacteraceae. Strain JA826T had highest sequence similarity with Rhodobacter maris JA276T (98.5 %), Rhodobacter viridis JA737T (97.5 %) and other members of the genus Rhodobacter (<97 %). Strain JA912T had highest sequence similarity with Rhodobacter viridis JA737T (99.6 %), Rhodobacter sediminis N1T (99.3 %), Rhodobacter capsulatus ATCC 11166T (98.8 %) and less than 97 % similarity with other members of the genus Rhodobacter. The 16S rRNA gene sequence similarity between strains JA826T and JA912T was 96.9 %. DNA-DNA hybridization showed that strains JA826T and JA912T (values among themselves and between the type strains of nearest members <44 %) did not belong to any of the nearest species of the genus Rhodobacter. However, strains JA912T and JA913 were closely related (DNA-DNA hybridization value >90 %). The genomic distinction was also supported by differences in phenotypic and chemotaxonomic characteristics in order to propose strains JA826T (=KCTC 15478T=LMG 28758T) and JA912T (=KCTC 15475T=LMG 28748T) as new species in the genus Rhodobacter sensu stricto with the names Rhodobacter lacus and Rhodobacter azollae, respectively.
从不同池塘样本中分离出三株菌株(JA826T、JA912T和JA913),它们呈黄棕色,杆状至椭圆形,革兰氏染色阴性,具运动性,是具有囊泡状胞内膜结构的光合细菌。这三株菌株的DNA G+C含量在64.6至65.5mol%之间。所有三株菌株的16S rRNA基因序列与红杆菌科严格意义上的红杆菌属模式菌株的相似度最高。菌株JA826T与海红杆菌JA276T(98.5%)、绿红杆菌JA737T(97.5%)以及红杆菌属的其他成员(<97%)具有最高的序列相似度。菌株JA912T与绿红杆菌JA737T(99.6%)、沉积红杆菌N1T(99.3%)、荚膜红杆菌ATCC 11166T(98.8%)具有最高的序列相似度,与红杆菌属的其他成员相似度小于97%。菌株JA826T和JA912T之间的16S rRNA基因序列相似度为96.9%。DNA-DNA杂交显示,菌株JA826T和JA912T(它们自身之间以及与最接近成员的模式菌株之间的值<44%)不属于红杆菌属的任何最接近物种。然而,菌株JA912T和JA913密切相关(DNA-DNA杂交值>90%)。表型和化学分类特征的差异也支持了基因组上的区分,从而分别将菌株JA826T(=KCTC 15478T=LMG 28758T)和JA912T(=KCTC 15475T=LMG 28748T)提议为严格意义上红杆菌属的新物种,分别命名为湖红杆菌和满江红红杆菌。