Mishra Kamal K, Singh Santosh K, Ghosh Paulami, Ghosh Debashree, Das Aloke
Department of Chemistry, Indian Institute of Science Education and Research (IISER), Dr Homi Bhabha Road, Pune-411008, India.
Phys Chem Chem Phys. 2017 Sep 13;19(35):24179-24187. doi: 10.1039/c7cp05265k.
Subsequent to the recent re-definition of hydrogen bonding by the IUPAC committee, there has been a growing search for finding the presence of this ever interesting non-covalent interaction between a hydrogen atom in an X-H group and any other atom in the periodic table. In recent gas phase experiments, it has been observed that hydrogen bonding interactions involving S and Se are of similar strength to those with an O atom. However, there is no clear explanation for the unusual strength of this interaction in the case of hydrogen bond acceptors which are not conventional electronegative atoms. In this work, we have explored the nature of Se hydrogen bonding by studying indoledimethyl selenide (indmse) and phenoldimethyl selenide (phdmse) complexes using gas phase IR spectroscopy and quantum chemistry calculations. We have found through various energy decomposition analysis (EDA) methods and natural bond orbital (NBO) calculations that, along with electrostatics and polarization, charge transfer interactions are important to understand Se/S hydrogen bonding and there is a delicate balance between the various interactions that plays the crucial role rather than a single component of the interaction energy. An in-depth understanding of this type of non-covalent interaction has immense significance in biology as amino acids containing S and Se are widely present in proteins and hence hydrogen bonding interactions involving S and Se atoms contribute to the folding of proteins.
在国际纯粹与应用化学联合会(IUPAC)委员会最近对氢键进行重新定义之后,人们越来越多地探索在X-H基团中的氢原子与元素周期表中的任何其他原子之间这种一直很有趣的非共价相互作用的存在情况。在最近的气相实验中,已经观察到涉及S和Se的氢键相互作用与那些与O原子的氢键相互作用强度相似。然而,对于这种相互作用在不是传统电负性原子的氢键受体情况下的异常强度,尚无明确解释。在这项工作中,我们通过使用气相红外光谱和量子化学计算研究吲哚二甲基硒化物(indmse)和苯酚二甲基硒化物(phdmse)配合物,探索了Se氢键的本质。我们通过各种能量分解分析(EDA)方法和自然键轨道(NBO)计算发现,除了静电作用和极化作用外,电荷转移相互作用对于理解Se/S氢键很重要,并且各种相互作用之间存在微妙的平衡,这种平衡起着关键作用,而不是相互作用能的单一组成部分。深入了解这种类型的非共价相互作用在生物学中具有巨大意义,因为含有S和Se的氨基酸广泛存在于蛋白质中,因此涉及S和Se原子的氢键相互作用有助于蛋白质的折叠。