School of Basic Medical Sciences/School of Biology and Engineering, Guizhou Medical University, Guiyang 550025, China.
Int J Mol Sci. 2024 May 21;25(11):5609. doi: 10.3390/ijms25115609.
Among various non-covalent interactions, selenium-centered chalcogen bonds (SeChBs) have garnered considerable attention in recent years as a result of their important contributions to crystal engineering, organocatalysis, molecular recognition, materials science, and biological systems. Herein, we systematically investigated π-hole-type SeO/S ChBs in the binary complexes of SeO with a series of O-/S-containing Lewis bases by means of high-level ab initio computations. The results demonstrate that there exists an attractive interaction between the Se atom of SeO and the O/S atom of Lewis bases. The interaction energies computed at the MP2/aug-cc-pVTZ level range from -4.68 kcal/mol to -10.83 kcal/mol for the SeO chalcogen-bonded complexes and vary between -3.53 kcal/mol and -13.77 kcal/mol for the SeS chalcogen-bonded complexes. The SeO/S ChBs exhibit a relatively short binding distance in comparison to the sum of the van der Waals radii of two chalcogen atoms. The SeO/S ChBs in all of the studied complexes show significant strength and a closed-shell nature, with a partially covalent character in most cases. Furthermore, the strength of these SeO/S ChBs generally surpasses that of the C/O-HO hydrogen bonds within the same complex. It should be noted that additional C/O-HO interactions have a large effect on the geometric structures and strength of SeOS ChBs. Two subunits are connected together mainly via the orbital interaction between the lone pair of O/S atoms in the Lewis bases and the BD*(OSe) anti-bonding orbital of SeO, except for the SeOHCSOH complex. The electrostatic component emerges as the largest attractive contributor for stabilizing the examined complexes, with significant contributions from induction and dispersion components as well.
在各种非共价相互作用中,硒中心的硫属键(SeChBs)近年来因其在晶体工程、有机催化、分子识别、材料科学和生物系统中的重要贡献而受到广泛关注。在此,我们通过高级从头算计算系统地研究了 SeO 与一系列 O-/S-含路易斯碱的二元复合物中的π-hole 型 SeO/S ChBs。结果表明,SeO 中的 Se 原子与路易斯碱的 O/S 原子之间存在吸引力相互作用。在 MP2/aug-cc-pVTZ 水平下计算的相互作用能对于 SeO 卤键配合物的范围为-4.68 kcal/mol 到-10.83 kcal/mol,对于 SeS 卤键配合物的范围为-3.53 kcal/mol 到-13.77 kcal/mol。与两个卤原子的范德华半径之和相比,SeO/S ChBs 具有相对较短的结合距离。在所研究的所有配合物中,SeO/S ChBs 表现出较强的强度和闭壳层性质,在大多数情况下具有部分共价性质。此外,这些 SeO/S ChBs 的强度通常超过同一配合物中 C/O-HO 氢键的强度。值得注意的是,额外的 C/O-HO 相互作用对 SeOS ChBs 的几何结构和强度有很大影响。除了 SeOHCSOH 配合物外,两个亚基主要通过路易斯碱中 O/S 原子的孤对和 SeO 的 BD*(OSe)反键轨道之间的轨道相互作用连接在一起。静电分量是稳定所研究配合物的最大吸引力贡献者,诱导和色散分量也有很大贡献。