Department of Biotechnology, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand 247667, India.
Department of Biotechnology, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand 247667, India.
Int J Biol Macromol. 2018 Jan;106:1089-1106. doi: 10.1016/j.ijbiomac.2017.08.105. Epub 2017 Aug 24.
The first committed step of the shikimate pathway is catalyzed by a metalloenzyme 3-deoxy-d-arabino-heptulosonate-7-phosphate synthase (DAH7PS), which exhibits vulnerability to the oxidative stress. DAH7PS undergoes inactivation in multiple ways in the presence of redox metal, HO, and superoxide. The molecular mechanism and susceptibility of its inactivation might differ in different organisms and are presently unclear. In the present work, we have cloned, expressed and purified a DAH7PS from Providencia alcalifaciens (PaDAH7PS). The oligomeric state and effect of redox metal treatment on its stability were analyzed through the size exclusion chromatography. The FTIR, MALDI-TOF/TOF-MS studies revealed that methionine residues were modified to methionine sulfoxide in PaDAH7PS. During oxidation, PaDAH7PS is altered into partially folded protein and unfolded states as determined by CD and Fluorescence studies. A significant loss in enzymatic activity of PaDAH7PS was determined and the formation of amorphous aggregates was visualized using AFM imaging and also confirmed by ThT binding based assay. This is the first report where we have shown a hexameric DAH7PS and the methionine residues of PaDAH7PS get oxidize in the presence of oxidative stress. The partially folded and unfolded oligomeric states with high β-content of PaDAH7PS might be the critical precursors for aggregation.
莽草酸途径的第一步是由金属酶 3-脱氧-D-阿拉伯庚酮糖-7-磷酸合酶(DAH7PS)催化的,该酶对氧化应激敏感。在存在氧化还原金属、HO 和超氧化物的情况下,DAH7PS 以多种方式失活。其失活的分子机制和敏感性在不同的生物体中可能不同,目前尚不清楚。在本工作中,我们从产碱普罗威登斯菌(PaDAH7PS)中克隆、表达和纯化了 DAH7PS。通过凝胶过滤层析分析了其寡聚状态和氧化还原金属处理对其稳定性的影响。FTIR、MALDI-TOF/TOF-MS 研究表明,PaDAH7PS 中的蛋氨酸残基被修饰为蛋氨酸亚砜。通过 CD 和荧光研究表明,在氧化过程中,PaDAH7PS 转变为部分折叠蛋白和无规则卷曲状态。通过测定 PaDAH7PS 的酶活性显著丧失,并使用 AFM 成像观察到无定形聚集体的形成,同时也通过 ThT 结合测定得到了证实。这是首次报道我们已经展示了一个六聚体 DAH7PS,并且 PaDAH7PS 的蛋氨酸残基在氧化应激存在下被氧化。具有高β含量的部分折叠和无规则卷曲的寡聚状态可能是聚集的关键前体。