• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

胚胎发育时间、轴向干细胞、染色质动力学与Hox时钟。

Embryonic timing, axial stem cells, chromatin dynamics, and the Hox clock.

作者信息

Deschamps Jacqueline, Duboule Denis

机构信息

Hubrecht Institute, University Medical Center Utrecht, 3584 CT Utrecht, the Netherlands.

School of Life Sciences, Ecole Polytechnique Fédérale, Lausanne, 1015 Lausanne, Switzerland.

出版信息

Genes Dev. 2017 Jul 15;31(14):1406-1416. doi: 10.1101/gad.303123.117.

DOI:10.1101/gad.303123.117
PMID:28860158
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5588924/
Abstract

Collinear regulation of genes in space and time has been an outstanding question ever since the initial work of Ed Lewis in 1978. Here we discuss recent advances in our understanding of this phenomenon in relation to novel concepts associated with large-scale regulation and chromatin structure during the development of both axial and limb patterns. We further discuss how this sequential transcriptional activation marks embryonic stem cell-like axial progenitors in mammals and, consequently, how a temporal genetic system is further translated into spatial coordinates via the fate of these progenitors. In this context, we argue the benefit and necessity of implementing this unique mechanism as well as the difficulty in evolving an alternative strategy to deliver this critical positional information.

摘要

自1978年埃德·刘易斯的开创性工作以来,基因在空间和时间上的共线性调控一直是一个悬而未决的重要问题。本文将探讨我们对这一现象理解的最新进展,这些进展与轴向和肢体模式发育过程中大规模调控及染色质结构相关的新概念有关。我们还将进一步讨论这种顺序性转录激活如何标记哺乳动物中胚胎干细胞样的轴向祖细胞,以及由此,一个时间性遗传系统如何通过这些祖细胞的命运进一步转化为空间坐标。在此背景下,我们阐述了实施这一独特机制的益处和必要性,以及演化出替代策略来传递这一关键位置信息的困难。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32bd/5588924/b495a409af20/1406f04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32bd/5588924/bcbcd50c27af/1406f01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32bd/5588924/353e68129be6/1406f02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32bd/5588924/13a1eb599650/1406f03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32bd/5588924/b495a409af20/1406f04.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32bd/5588924/bcbcd50c27af/1406f01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32bd/5588924/353e68129be6/1406f02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32bd/5588924/13a1eb599650/1406f03.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/32bd/5588924/b495a409af20/1406f04.jpg

相似文献

1
Embryonic timing, axial stem cells, chromatin dynamics, and the Hox clock.胚胎发育时间、轴向干细胞、染色质动力学与Hox时钟。
Genes Dev. 2017 Jul 15;31(14):1406-1416. doi: 10.1101/gad.303123.117.
2
Chromatin architectures and Hox gene collinearity.染色质结构与 Hox 基因共线性。
Curr Top Dev Biol. 2013;104:113-48. doi: 10.1016/B978-0-12-416027-9.00004-8.
3
Epigenetic temporal control of mouse Hox genes in vivo.小鼠体内Hox基因的表观遗传时间控制
Science. 2009 Jun 5;324(5932):1320-3. doi: 10.1126/science.1171468.
4
Chromatin organization and global regulation of Hox gene clusters.染色质组织和 Hox 基因簇的全局调控。
Philos Trans R Soc Lond B Biol Sci. 2013 May 6;368(1620):20120367. doi: 10.1098/rstb.2012.0367. Print 2013.
5
Temporal dynamics and developmental memory of 3D chromatin architecture at Hox gene loci.Hox基因座处三维染色质结构的时间动态和发育记忆
Elife. 2014 Apr 29;3:e02557. doi: 10.7554/eLife.02557.
6
Hox genes regulation in vertebrates.脊椎动物 Hox 基因的调控。
Dev Dyn. 2014 Jan;243(1):49-58. doi: 10.1002/dvdy.24014. Epub 2013 Sep 2.
7
40 years of the homeobox: mechanisms of Hox spatial-temporal collinearity in vertebrates.同源异型框40年:脊椎动物中Hox基因时空共线性的机制
Development. 2024 Aug 15;151(16). doi: 10.1242/dev.202508. Epub 2024 Aug 21.
8
Hox gene regulation and timing in embryogenesis.胚胎发育过程中的Hox基因调控与时间安排。
Semin Cell Dev Biol. 2014 Oct;34:76-84. doi: 10.1016/j.semcdb.2014.06.005. Epub 2014 Jun 12.
9
Organizing axes in time and space; 25 years of colinear tinkering.在时间和空间中构建轴;25年的共线性微调。
Science. 2003 Jul 18;301(5631):331-3. doi: 10.1126/science.1085753.
10
The function of Hox genes in the morphogenesis of the vertebrate limb.Hox基因在脊椎动物肢体形态发生中的作用。
Ann Genet. 1993;36(1):24-9.

引用本文的文献

1
A Biophysics of Epigenetic Rejuvenation.表观遗传年轻化的生物物理学
Cells. 2025 Aug 13;14(16):1249. doi: 10.3390/cells14161249.
2
Genetic variation reveals a homeotic long noncoding RNA that modulates human hematopoietic stem cells.基因变异揭示了一种调控人类造血干细胞的同源异型长链非编码RNA。
bioRxiv. 2025 Jul 16:2025.07.16.664824. doi: 10.1101/2025.07.16.664824.
3
The Chronological Trigger: The Orchestra Between Homeobox Genes and the Circadian Clock During Development.时间触发因素:发育过程中同源异型基因与生物钟之间的协调作用

本文引用的文献

1
SET1A/COMPASS and shadow enhancers in the regulation of homeotic gene expression.SET1A/COMPASS与影子增强子在同源异型基因表达调控中的作用
Genes Dev. 2017 Apr 15;31(8):787-801. doi: 10.1101/gad.294744.116. Epub 2017 May 9.
2
Causal role for inheritance of H3K27me3 in maintaining the OFF state of a HOX gene.H3K27me3的遗传在维持HOX基因的关闭状态中的因果作用。
Science. 2017 Apr 7;356(6333). doi: 10.1126/science.aai8236. Epub 2017 Mar 16.
3
Integration of Shh and Fgf signaling in controlling gene expression in cultured limb cells.
Biol Cell. 2025 Jul;117(7):e70027. doi: 10.1111/boc.70027.
4
Sp Transcription Factors Establish the Signaling Environment in the Neuromesodermal Progenitor Niche During Axial Elongation.Sp转录因子在轴向伸长过程中建立神经中胚层祖细胞生态位中的信号环境。
bioRxiv. 2025 Jun 4:2025.06.03.657492. doi: 10.1101/2025.06.03.657492.
5
Cohesin in 3D: development, differentiation, and disease.三维空间中的黏连蛋白:发育、分化与疾病
Genes Dev. 2025 Jun 2;39(11-12):679-696. doi: 10.1101/gad.352671.125.
6
Estrogen inhibits hepatocellular carcinoma progression dependent on HOXA11-AS/HOXA11.雌激素通过依赖HOXA11-AS/HOXA11抑制肝细胞癌进展。
Transl Oncol. 2025 Jul;57:102404. doi: 10.1016/j.tranon.2025.102404. Epub 2025 May 8.
7
A differential requirement for ciliary transition zone proteins in human and mouse neural progenitor fate specification.人类和小鼠神经祖细胞命运特化过程中纤毛过渡区蛋白的差异需求。
Nat Commun. 2025 Apr 5;16(1):3258. doi: 10.1038/s41467-025-58554-3.
8
The HOX code of human adult fibroblasts reflects their ectomesenchymal or mesodermal origin.人类成纤维细胞的同源框基因编码反映了它们的外间充质或中胚层起源。
Histochem Cell Biol. 2025 Mar 10;163(1):38. doi: 10.1007/s00418-025-02362-9.
9
Homeodomain Involvement in Nuclear HOX Protein Homo- and Heterodimerization.同源结构域参与核HOX蛋白的同二聚化和异二聚化。
Int J Mol Sci. 2025 Jan 6;26(1):423. doi: 10.3390/ijms26010423.
10
Loss of Hoxa5 function affects Hox gene expression in different biological contexts.Hoxa5功能缺失在不同生物学背景下会影响Hox基因的表达。
Sci Rep. 2024 Dec 28;14(1):30903. doi: 10.1038/s41598-024-81867-0.
Shh和Fgf信号通路在调控培养的肢体细胞基因表达中的整合作用。
Proc Natl Acad Sci U S A. 2017 Mar 21;114(12):3139-3144. doi: 10.1073/pnas.1620767114. Epub 2017 Mar 7.
4
Polycomb Repressive Complex 1 Generates Discrete Compacted Domains that Change during Differentiation.多梳抑制复合体1产生在分化过程中发生变化的离散紧密结构域。
Mol Cell. 2017 Feb 2;65(3):432-446.e5. doi: 10.1016/j.molcel.2017.01.009.
5
CTCF-mediated topological boundaries during development foster appropriate gene regulation.发育过程中CTCF介导的拓扑边界促进适当的基因调控。
Genes Dev. 2016 Dec 15;30(24):2657-2662. doi: 10.1101/gad.288324.116.
6
Cdx is crucial for the timing mechanism driving colinear Hox activation and defines a trunk segment in the Hox cluster topology.Cdx对于驱动共线性Hox激活的时间机制至关重要,并在Hox簇拓扑结构中定义了一个躯干节段。
Dev Biol. 2017 Feb 15;422(2):146-154. doi: 10.1016/j.ydbio.2016.12.024. Epub 2016 Dec 29.
7
Cdx and T Brachyury Co-activate Growth Signaling in the Embryonic Axial Progenitor Niche.Cdx和T短尾基因在胚胎轴祖细胞龛中共激活生长信号。
Cell Rep. 2016 Dec 20;17(12):3165-3177. doi: 10.1016/j.celrep.2016.11.069.
8
Distal Limb Patterning Requires Modulation of cis-Regulatory Activities by HOX13.远端肢体模式形成需要HOX13对顺式调控活性进行调节。
Cell Rep. 2016 Dec 13;17(11):2913-2926. doi: 10.1016/j.celrep.2016.11.039.
9
Control of Hoxd gene transcription in the mammary bud by hijacking a preexisting regulatory landscape.通过利用预先存在的调控格局来控制乳腺芽中Hoxd基因的转录。
Proc Natl Acad Sci U S A. 2016 Nov 29;113(48):E7720-E7729. doi: 10.1073/pnas.1617141113. Epub 2016 Nov 15.
10
Polarized regulatory landscape and Wnt responsiveness underlie Hox activation in embryos.极化的调控格局和Wnt反应性是胚胎中Hox激活的基础。
Genes Dev. 2016 Sep 1;30(17):1937-42. doi: 10.1101/gad.285767.116. Epub 2016 Sep 15.