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从尸检材料中分离出的osk_001菌株的全基因组序列

Whole-Genome Sequence of Strain osk_001, Isolated from Postmortem Material.

作者信息

Yoshizawa Hidenori, Motooka Daisuke, Katada Ryuichi, Matsumoto Yuki, Nakamura Shota, Morii Eiichi, Iida Tetsuya, Matsumoto Hiroshi

机构信息

Department of Legal Medicine, Osaka University Graduate School of Medicine, Osaka, Japan.

Project for Death Control and Prevention, Osaka University Graduate School of Medicine, Osaka, Japan.

出版信息

Genome Announc. 2017 Aug 31;5(35):e00878-17. doi: 10.1128/genomeA.00878-17.

DOI:10.1128/genomeA.00878-17
PMID:28860244
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5578842/
Abstract

was recently described as a novel species, and some strains are highly virulent. We detected in infected tissue sampled by necropsy. In order to characterize and confirm the virulence of this species, whole-genome sequencing of the pure cultured bacterium was performed. We found that the strain has specific and unique genetic elements contained in highly virulent strains of .

摘要

最近被描述为一个新物种，并且一些菌株具有高毒力。我们在尸检采集的感染组织中检测到了它。为了表征和确认该物种的毒力，对纯培养的细菌进行了全基因组测序。我们发现该菌株具有包含在[具体细菌名称]高毒力菌株中的特定且独特的遗传元件。

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本文引用的文献

1
Comparative Genomics Analysis of Streptococcus tigurinus Strains Identifies Genetic Elements Specifically and Uniquely Present in Highly Virulent Strains.嗜虎链球菌菌株的比较基因组学分析确定了高毒力菌株中特有的遗传元件。
PLoS One. 2016 Aug 9;11(8):e0160554. doi: 10.1371/journal.pone.0160554. eCollection 2016.
2
Bacterial Translocation and Sample Contamination in Postmortem Microbiological Analyses.死后微生物学分析中的细菌易位与样本污染
J Forensic Sci. 2016 Mar;61(2):367-374. doi: 10.1111/1556-4029.12991. Epub 2015 Dec 31.
3
Clinical Significance and Characterization of Streptococcus tigurinus Isolates in an Adult Population.成人人群中蒂氏链球菌分离株的临床意义及特征
J Clin Microbiol. 2015 Nov;53(11):3574-9. doi: 10.1128/JCM.01551-15. Epub 2015 Sep 9.
4
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data.非杂交、基于长读长 SMRT 测序数据的完成微生物基因组组装。
Nat Methods. 2013 Jun;10(6):563-9. doi: 10.1038/nmeth.2474. Epub 2013 May 5.
5
Streptococcus tigurinus, a novel member of the Streptococcus mitis group, causes invasive infections.无乳链球菌，口腔链球菌属的一个新成员，可引起侵袭性感染。
J Clin Microbiol. 2012 Sep;50(9):2969-73. doi: 10.1128/JCM.00849-12. Epub 2012 Jul 3.
6
Streptococcus tigurinus sp. nov., isolated from blood of patients with endocarditis, meningitis and spondylodiscitis.土伦链球菌，从心内膜炎、脑膜炎和脊椎骨髓炎患者的血液中分离得到。
Int J Syst Evol Microbiol. 2012 Dec;62(Pt 12):2941-2945. doi: 10.1099/ijs.0.038299-0. Epub 2012 Feb 21.