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浮游植物形状的拉普拉斯特征描述。

A Laplacian characterization of phytoplankton shape.

作者信息

Cael B B, Strong Courtenay

机构信息

Massachusetts Institute of Technology, 77 Massachusetts Ave, 54-1511, Cambridge, MA, 02139, USA.

Woods Hole Oceanographic Institution, 86 Water St, Woods Hole, MA, 02543, USA.

出版信息

J Math Biol. 2018 May;76(6):1327-1338. doi: 10.1007/s00285-017-1176-8. Epub 2017 Sep 1.

DOI:10.1007/s00285-017-1176-8
PMID:28865005
Abstract

Phytoplankton exhibit pronounced morphological diversity, impacting a range of processes. Because these impacts are challenging to quantify, however, phytoplankton are often approximated as spheres, and when effects of non-sphericity are studied it is usually experimentally or via geometrical approximations. New methods for quantifying phytoplankton size and shape generally, so all phytoplankton are analyzable by the same procedure, can complement advances in microscopic imagery and automated classification to study the influence of shape in phytoplankton. Here we apply to phytoplankton a technique for defining the size of arbitrary shapes based on the Laplacian-the operator that governs processes, such as nutrient uptake and fluid flow, where phytoplankton shape is expected to have the greatest effect. Deviations from values given by spherical approximation are a measure of phytoplankton shape and indicate the fitness increases for phytoplankton conferred by their non-spherical shapes. Comparison with surface-to-volume quotients suggests the Laplacian-based metric is insensitive to small-scale features which can increase surface area without affecting key processes, but is otherwise closely related to surface-area-to-volume, demonstrating this metric is a meaningful measure. While our analysis herein is limited to axisymmetric phytoplankton due to relative sparsity of 3D information about other phytoplankton shapes, the definition and method are directly generalizable to 3D shape data, which will in the near future be more readily available.

摘要

浮游植物呈现出显著的形态多样性,影响着一系列过程。然而,由于这些影响难以量化,浮游植物通常被近似为球体,而在研究非球形的影响时,通常是通过实验或几何近似的方法。一般而言,用于量化浮游植物大小和形状的新方法,使得所有浮游植物都能通过相同的程序进行分析,这可以补充显微成像和自动分类技术的进展,从而研究浮游植物形状的影响。在此,我们将一种基于拉普拉斯算子(该算子控制着诸如营养吸收和流体流动等过程,在这些过程中浮游植物形状预计会产生最大影响)来定义任意形状大小的技术应用于浮游植物。与球形近似值的偏差是浮游植物形状的一种度量,表明非球形赋予浮游植物的适应性增加。与表面积与体积比的比较表明,基于拉普拉斯算子的度量对那些能够增加表面积而不影响关键过程的小尺度特征不敏感,但在其他方面与表面积与体积密切相关,这表明该度量是一种有意义的度量。虽然由于关于其他浮游植物形状的三维信息相对较少,我们在此的分析仅限于轴对称浮游植物,但该定义和方法可直接推广到三维形状数据,而在不久的将来,三维形状数据将更容易获得。

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