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星果棕属(棕榈科)三种植物的群体遗传结构

Population genetic structure of three species in the genus Astrocaryum G. Mey. (Arecaceae).

作者信息

Oliveira N P, Oliveira M S P, Davide L C, Kalisz S

机构信息

Laboratório de Citogenética, Universidade Federal de Lavras, Lavras, MG, Brasil

Laboratório de Genética Molecular, Embrapa Amazônia Oriental, , Brasil.

出版信息

Genet Mol Res. 2017 Aug 31;16(3):gmr-16-03-gmr.16039676. doi: 10.4238/gmr16039676.

DOI:10.4238/gmr16039676
PMID:28873204
Abstract

We assessed the level and distribution of genetic diversity in three species of the economically important palm genus Astrocaryum located in Pará State, in northern Brazil. Samples were collected in three municipalities for Astrocaryum aculeatum: Belterra, Santarém, and Terra Santa; and in two municipalities for both A. murumuru: Belém and Santo Antônio do Tauá and A. paramaca: Belém and Ananindeua. Eight microsatellite loci amplified well and were used for genetic analysis. The mean number of alleles per locus for A. aculeatum, A. murumuru, and A. paramaca were 2.33, 2.38, and 2.06, respectively. Genetic diversity was similar for the three species, ranging from H = 0.222 in A. aculeatum to H = 0.254 in A. murumuru. Both F and AMOVA showed that most of the genetic variation was found within populations for all three species, but high genetic differentiation among populations was found for A. aculeatum. Three loci were not in Hardy-Weinberg equilibrium, with populations of A. paramaca showing a tendency for the excess of heterozygotes (F = -0.144). Gene flow was high for populations of A. paramaca (N = 19.35). Our results suggest that the genetic diversity within populations followed the genetic differentiation among populations due to high gene flow among the population. Greater geographic distances among the three collection sites for A. aculeatum likely hampered gene flow for this species.

摘要

我们评估了位于巴西北部帕拉州的经济上重要的棕榈属植物Astrocaryum三个物种的遗传多样性水平和分布情况。在三个市镇采集了A. aculeatum的样本:贝莱特拉、圣塔伦和特拉圣塔;在两个市镇采集了A. murumuru和A. paramaca的样本:贝伦和陶阿河畔圣安东尼奥以及贝伦和阿纳尼德乌。八个微卫星位点扩增效果良好,并用于遗传分析。A. aculeatum、A. murumuru和A. paramaca每个位点的平均等位基因数分别为2.33、2.38和2.06。这三个物种的遗传多样性相似,范围从A. aculeatum的H = 0.222到A. murumuru的H = 0.254。F统计量和分子方差分析(AMOVA)均表明,所有三个物种的大部分遗传变异存在于种群内部,但A. aculeatum的种群间存在高度遗传分化。三个位点不符合哈迪-温伯格平衡,A. paramaca的种群表现出杂合子过剩的趋势(F = -0.144)。A. paramaca种群的基因流较高(N = 19.35)。我们的结果表明,由于种群间的高基因流,种群内的遗传多样性遵循种群间的遗传分化。A. aculeatum的三个采集地点之间较大的地理距离可能阻碍了该物种的基因流。

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引用本文的文献

1
Natural Populations of Meyer in Amazonia: Genetic Diversity and Conservation.亚马逊地区迈耶的自然种群:遗传多样性与保护
Plants (Basel). 2022 Nov 2;11(21):2957. doi: 10.3390/plants11212957.
2
The plastomes of Astrocaryum aculeatum G. Mey. and A. murumuru Mart. show a flip-flop recombination between two short inverted repeats.星油藤和星大戟的质体基因组显示两个短反向重复之间发生了颠换重组。
Planta. 2019 Oct;250(4):1229-1246. doi: 10.1007/s00425-019-03217-z. Epub 2019 Jun 20.