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从沿海海洋沉积物中分离出的一种专性厌氧细菌——海洋螺旋体新属新种的描述,以及将海滨螺旋体重新分类为海滨海洋螺旋体新组合。

Description of Oceanispirochaeta sediminicola gen. nov., sp. nov., an obligately anaerobic bacterium isolated from coastal marine sediments, and reclassification of Spirochaeta litoralis as Oceanispirochaeta litoralis comb. nov.

作者信息

Subhash Y, Lee Sang-Seob

机构信息

Department of Life Science, College of Natural Science, Kyonggi University, 154-42 Gwanggyosan-ro Yeongtong-gu Suwon-Si, Gyeonggi-Do 16227, Republic of Korea.

出版信息

Int J Syst Evol Microbiol. 2017 Sep;67(9):3403-3409. doi: 10.1099/ijsem.0.002130. Epub 2017 Sep 6.

Abstract

An obligately anaerobic spirochaete (strain SY2T) was isolated from coastal marine sediments of Tongyeong-Si, South Korea. Strain SY2T was helical-shaped and Gram-stain-negative. Strain SY2T was able to grow at 10-40 °C (optima, 25-30 °C), pH 6.3-8.8 (optima, pH 7.0-8.0) and with 1-7 % (optimum, 2-3 %) NaCl concentration. Strain SY2T was negative for catalase and oxidase activity. The major end-products of glucose fermentation were acetate, ethanol, hydrogen and carbon dioxide. C14 : 0, C16 : 0, iso-C15 : 0, iso-C14 : 0 3-OH, iso-C15 : 1 H/C13 : 0 3-OH and iso-C17 : 1ω9c were predominant fatty acids (>5 %) with minor amounts (<5 %) of C18 : 0, iso-C13 : 0, iso-C17 : 0, iso-C17 : 1/anteiso-C17 : 1 B and C16 : 1ω6c/C16 : 1ω7c. Diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine were major polar lipids. The genomic DNA G+C content was 53.5 mol%. 16S rRNA gene sequence comparisons indicated that strain SY2T represents a member of the family Spirochaetaceae in the phylum Spirochaetes. Strain SY2T has a sequence similarity of 95.1 % with Spirochaeta litoralis R1T and <90.1 % with other members of the genus Spirochaeta. Distinct morphological, physiological and genotypic differences from the previously described taxa support the classification of strain SY2T as a representative of a novel genus and species in the family Spirochaetaceae, for which the name Oceanispirochaeta sediminicola gen. nov., sp. nov. is proposed. The type strain is SY2T (=KEMB 3001-381T=DSM 104770T=KCTC 15593T). Reclassification of Spirochaeta litoralis as Oceanispirochaeta litoralis comb. nov. is also proposed based on polyphasic taxonomic analyses.

摘要

从韩国统营市的沿海海洋沉积物中分离出一种专性厌氧螺旋体(菌株SY2T)。菌株SY2T呈螺旋状,革兰氏染色阴性。菌株SY2T能够在10-40 °C(最适温度为25-30 °C)、pH 6.3-8.8(最适pH为7.0-8.0)以及NaCl浓度为1-7 %(最适浓度为2-3 %)的条件下生长。菌株SY2T的过氧化氢酶和氧化酶活性均为阴性。葡萄糖发酵的主要终产物为乙酸盐、乙醇、氢气和二氧化碳。C14 : 0、C16 : 0、异-C15 : 0、异-C14 : 0 3-OH 、异-C15 : 1 H/C13 : 0 3-OH和异-C17 : 1ω9c是主要脂肪酸(>5 %),C18 : 0、异-C13 : 0、异-C17 : 0、异-C17 : 1/anteiso-C17 : 1 B和C16 : 1ω6c/C16 : 1ω7c含量较少(<5 %)。双磷脂酰甘油、磷脂酰甘油和磷脂酰乙醇胺是主要极性脂质。基因组DNA的G+C含量为53.5 mol%。16S rRNA基因序列比较表明,菌株SY2T代表螺旋体门螺旋体科的一个成员。菌株SY2T与滨海螺旋体R1T的序列相似性为95.1 %,与螺旋体属其他成员的序列相似性<90.1 %。与先前描述的分类单元在形态、生理和基因型上存在明显差异,这支持将菌株SY2T分类为螺旋体科一个新属和新种的代表,为此提出新属名Oceanispirochaeta,新种名sediminicola。模式菌株为SY2T(=KEMB 3001-381T=DSM 104770T=KCTC 15593T)。基于多相分类分析,还建议将滨海螺旋体重新分类为滨海海洋螺旋体(Oceanispirochaeta litoralis)新组合。

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