Subhash Y, Lee Sang-Seob
Department of Life Science, College of Natural Science, Kyonggi University, 154-42 Gwanggyosan-ro Yeongtong-gu Suwon-Si, Gyeonggi-Do 16227, Republic of Korea.
Int J Syst Evol Microbiol. 2017 Sep;67(9):3403-3409. doi: 10.1099/ijsem.0.002130. Epub 2017 Sep 6.
An obligately anaerobic spirochaete (strain SY2T) was isolated from coastal marine sediments of Tongyeong-Si, South Korea. Strain SY2T was helical-shaped and Gram-stain-negative. Strain SY2T was able to grow at 10-40 °C (optima, 25-30 °C), pH 6.3-8.8 (optima, pH 7.0-8.0) and with 1-7 % (optimum, 2-3 %) NaCl concentration. Strain SY2T was negative for catalase and oxidase activity. The major end-products of glucose fermentation were acetate, ethanol, hydrogen and carbon dioxide. C14 : 0, C16 : 0, iso-C15 : 0, iso-C14 : 0 3-OH, iso-C15 : 1 H/C13 : 0 3-OH and iso-C17 : 1ω9c were predominant fatty acids (>5 %) with minor amounts (<5 %) of C18 : 0, iso-C13 : 0, iso-C17 : 0, iso-C17 : 1/anteiso-C17 : 1 B and C16 : 1ω6c/C16 : 1ω7c. Diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine were major polar lipids. The genomic DNA G+C content was 53.5 mol%. 16S rRNA gene sequence comparisons indicated that strain SY2T represents a member of the family Spirochaetaceae in the phylum Spirochaetes. Strain SY2T has a sequence similarity of 95.1 % with Spirochaeta litoralis R1T and <90.1 % with other members of the genus Spirochaeta. Distinct morphological, physiological and genotypic differences from the previously described taxa support the classification of strain SY2T as a representative of a novel genus and species in the family Spirochaetaceae, for which the name Oceanispirochaeta sediminicola gen. nov., sp. nov. is proposed. The type strain is SY2T (=KEMB 3001-381T=DSM 104770T=KCTC 15593T). Reclassification of Spirochaeta litoralis as Oceanispirochaeta litoralis comb. nov. is also proposed based on polyphasic taxonomic analyses.
从韩国统营市的沿海海洋沉积物中分离出一种专性厌氧螺旋体(菌株SY2T)。菌株SY2T呈螺旋状,革兰氏染色阴性。菌株SY2T能够在10-40 °C(最适温度为25-30 °C)、pH 6.3-8.8(最适pH为7.0-8.0)以及NaCl浓度为1-7 %(最适浓度为2-3 %)的条件下生长。菌株SY2T的过氧化氢酶和氧化酶活性均为阴性。葡萄糖发酵的主要终产物为乙酸盐、乙醇、氢气和二氧化碳。C14 : 0、C16 : 0、异-C15 : 0、异-C14 : 0 3-OH 、异-C15 : 1 H/C13 : 0 3-OH和异-C17 : 1ω9c是主要脂肪酸(>5 %),C18 : 0、异-C13 : 0、异-C17 : 0、异-C17 : 1/anteiso-C17 : 1 B和C16 : 1ω6c/C16 : 1ω7c含量较少(<5 %)。双磷脂酰甘油、磷脂酰甘油和磷脂酰乙醇胺是主要极性脂质。基因组DNA的G+C含量为53.5 mol%。16S rRNA基因序列比较表明,菌株SY2T代表螺旋体门螺旋体科的一个成员。菌株SY2T与滨海螺旋体R1T的序列相似性为95.1 %,与螺旋体属其他成员的序列相似性<90.1 %。与先前描述的分类单元在形态、生理和基因型上存在明显差异,这支持将菌株SY2T分类为螺旋体科一个新属和新种的代表,为此提出新属名Oceanispirochaeta,新种名sediminicola。模式菌株为SY2T(=KEMB 3001-381T=DSM 104770T=KCTC 15593T)。基于多相分类分析,还建议将滨海螺旋体重新分类为滨海海洋螺旋体(Oceanispirochaeta litoralis)新组合。