Gakh Oleksandr, Ranatunga Wasantha, Galeano Belinda K, Smith Douglas S, Thompson James R, Isaya Grazia
Mayo Clinic, Rochester, MN, United States.
Mayo Clinic, Rochester, MN, United States.
Methods Enzymol. 2017;595:107-160. doi: 10.1016/bs.mie.2017.07.003. Epub 2017 Aug 18.
Although Fe-S clusters may assemble spontaneously from elemental iron and sulfur in protein-free systems, the potential toxicity of free Fe, Fe, and S ions in aerobic environments underscores the requirement for specialized proteins to oversee the safe assembly of Fe-S clusters in living cells. Prokaryotes first developed multiprotein systems for Fe-S cluster assembly, from which mitochondria later derived their own system and became the main Fe-S cluster suppliers for eukaryotic cells. Early studies in yeast and human mitochondria indicated that Fe-S cluster assembly in eukaryotes is centered around highly conserved Fe-S proteins (human ISCU) that serve as scaffolds upon which new Fe-S clusters are assembled from (i) elemental sulfur, provided by a pyridoxal phosphate-dependent cysteine desulfurase (human NFS1) and its stabilizing-binding partner (human ISD11), and (ii) elemental iron, provided by an iron-binding protein of the frataxin family (human FXN). Further studies revealed that all of these proteins could form stable complexes that could reach molecular masses of megadaltons. However, the protein-protein interaction surfaces, catalytic mechanisms, and overall architecture of these macromolecular machines remained undefined for quite some time. The delay was due to difficulties inherent in reconstituting these very large multiprotein complexes in vitro or isolating them from cells in sufficient quantities to enable biochemical and structural studies. Here, we describe approaches we developed to reconstitute the human Fe-S cluster assembly machinery in Escherichia coli and to define its remarkable architecture.
尽管铁硫簇可能在无蛋白质体系中由元素铁和硫自发组装而成,但在有氧环境中游离的铁离子、亚铁离子和硫离子具有潜在毒性,这凸显了在活细胞中需要专门的蛋白质来监督铁硫簇的安全组装。原核生物首先开发了用于铁硫簇组装的多蛋白系统,线粒体后来从中衍生出自己的系统,并成为真核细胞的主要铁硫簇供应者。早期对酵母和人类线粒体的研究表明,真核生物中的铁硫簇组装以高度保守的铁硫蛋白(人类ISCU)为中心,这些蛋白作为支架,新的铁硫簇在其上由以下物质组装而成:(i)由磷酸吡哆醛依赖性半胱氨酸脱硫酶(人类NFS1)及其稳定结合伴侣(人类ISD11)提供的元素硫,以及(ii)由frataxin家族的铁结合蛋白(人类FXN)提供的元素铁。进一步的研究表明,所有这些蛋白质都能形成稳定的复合物,其分子量可达兆道尔顿。然而,这些大分子机器的蛋白质-蛋白质相互作用表面、催化机制和整体结构在相当长的一段时间内仍不明确。延迟的原因在于在体外重建这些非常大的多蛋白复合物或从细胞中大量分离它们以进行生化和结构研究存在固有的困难。在这里,我们描述了我们开发的在大肠杆菌中重建人类铁硫簇组装机制并确定其显著结构的方法。