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R2的基因组序列草图,包含用于苯酚羟化酶的芳香化合物降解基因。

Draft Genome Sequence of R2, Consisting of Aromatic Compound Degradation Genes for Phenol Hydroxylase.

作者信息

Azwani Fatma, Suzuki Kenshi, Honjyo Masahiro, Tashiro Yosuke, Futamata Hiroyuki

机构信息

Institute of Tropical Agriculture and Food Security, Universiti Putra Malaysia, Serdang, Selangor, Malaysia

Graduate School of Science and Technology, Shizuoka University, Hamamatsu, Shizuoka, Japan.

出版信息

Genome Announc. 2017 Sep 7;5(36):e00875-17. doi: 10.1128/genomeA.00875-17.

DOI:10.1128/genomeA.00875-17
PMID:28883136
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5589530/
Abstract

strain R2 was isolated from a continuous culture enriched by a low concentration of phenol-oxygenating activities with low values (below 1 μM). The draft genome sequence of strain R2 reported here may contribute to determining the phenol degradation gene cluster.

摘要

菌株R2是从一种连续培养物中分离出来的,该培养物通过低浓度(低于1μM)的苯酚氧化活性富集。本文报道的菌株R2的基因组草图序列可能有助于确定苯酚降解基因簇。

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本文引用的文献

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Draft Genome Sequence of Pseudomonas sp. LAB-08 Isolated from Trichloroethene-Contaminated Aquifer Soil.从三氯乙烯污染的含水层土壤中分离出的假单胞菌属LAB-08的基因组序列草图
Genome Announc. 2016 Sep 22;4(5):e00948-16. doi: 10.1128/genomeA.00948-16.
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Interspecies interactions are an integral determinant of microbial community dynamics.种间相互作用是微生物群落动态的一个重要决定因素。
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The RAST Server: rapid annotations using subsystems technology.RAST服务器:使用子系统技术进行快速注释。
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Genome sequencing in microfabricated high-density picolitre reactors.微制造高密度皮升反应器中的基因组测序
Nature. 2005 Sep 15;437(7057):376-80. doi: 10.1038/nature03959. Epub 2005 Jul 31.
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Group-specific monitoring of phenol hydroxylase genes for a functional assessment of phenol-stimulated trichloroethylene bioremediation.针对苯酚刺激的三氯乙烯生物修复功能评估对苯酚羟化酶基因进行组特异性监测。
Appl Environ Microbiol. 2001 Oct;67(10):4671-7. doi: 10.1128/AEM.67.10.4671-4677.2001.
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Diversity in kinetics of trichloroethylene-degrading activities exhibited by phenol-degrading bacteria.苯酚降解菌对三氯乙烯降解活性的动力学表现存在差异。
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Bioinformatics. 2000 Oct;16(10):944-5. doi: 10.1093/bioinformatics/16.10.944.
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Mol Microbiol. 1999 Sep;33(6):1132-40. doi: 10.1046/j.1365-2958.1999.01554.x.
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Microbiology (Reading). 1998 Oct;144 ( Pt 10):2895-2903. doi: 10.1099/00221287-144-10-2895.
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