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苯酚降解菌硼酸变栖菌c24菌株的基因组序列草图

Draft Genome Sequence of Phenol-Degrading Variovorax boronicumulans Strain c24.

作者信息

Abdul Aziz Fatma Azwani, Suzuki Kenshi, Amano Koki, Moriuchi Ryota, Dohra Hideo, Tashiro Yosuke, Futamata Hiroyuki

机构信息

Institute of Tropical Agriculture and Food Security, Universiti Putra Malaysia, Serdang, Selangor, Malaysia

Graduate School of Science and Technology, Shizuoka University, Hamamatsu, Shizuoka, Japan.

出版信息

Microbiol Resour Announc. 2020 Sep 10;9(37):e00597-20. doi: 10.1128/MRA.00597-20.

Abstract

We report the draft genome sequence of strain c24, which was isolated from a soil-inoculated chemostat culture amended with phenol as a sole carbon and energy source. The genome data will provide insights into phenol and other xenobiotic compound degradation mechanisms for bioremediation applications.

摘要

我们报告了菌株c24的基因组序列草图,该菌株是从以苯酚作为唯一碳源和能源的土壤接种恒化器培养物中分离得到的。这些基因组数据将为生物修复应用中苯酚及其他外源化合物的降解机制提供见解。

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本文引用的文献

1
Draft Genome Sequence of the Phenol-Degrading Bacterium sp. Strain P-10, Isolated from Trichloroethene-Contaminated Aquifer Soil.
Microbiol Resour Announc. 2018 Nov 8;7(18). doi: 10.1128/MRA.01009-18. eCollection 2018 Nov.
2
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication.
Bioinformatics. 2018 Mar 15;34(6):1037-1039. doi: 10.1093/bioinformatics/btx713.
3
Draft Genome Sequence of R2, Consisting of Aromatic Compound Degradation Genes for Phenol Hydroxylase.
Genome Announc. 2017 Sep 7;5(36):e00875-17. doi: 10.1128/genomeA.00875-17.
4
Draft Genome Sequence of Pseudomonas sp. LAB-08 Isolated from Trichloroethene-Contaminated Aquifer Soil.
Genome Announc. 2016 Sep 22;4(5):e00948-16. doi: 10.1128/genomeA.00948-16.
5
JSpeciesWS: a web server for prokaryotic species circumscription based on pairwise genome comparison.
Bioinformatics. 2016 Mar 15;32(6):929-31. doi: 10.1093/bioinformatics/btv681. Epub 2015 Nov 16.
6
Trimmomatic: a flexible trimmer for Illumina sequence data.
Bioinformatics. 2014 Aug 1;30(15):2114-20. doi: 10.1093/bioinformatics/btu170. Epub 2014 Apr 1.
7
Metabolic characteristics of the species Variovorax paradoxus.
Appl Microbiol Biotechnol. 2013 Jan;97(2):541-60. doi: 10.1007/s00253-012-4585-z. Epub 2012 Nov 29.
8
Qualimap: evaluating next-generation sequencing alignment data.
Bioinformatics. 2012 Oct 15;28(20):2678-9. doi: 10.1093/bioinformatics/bts503. Epub 2012 Aug 22.
9
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.

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