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弗洛鲁支原体基因组的克隆与移植

Cloning and Transplantation of the Mesoplasma florum Genome.

作者信息

Baby Vincent, Labroussaa Fabien, Brodeur Joëlle, Matteau Dominick, Gourgues Géraldine, Lartigue Carole, Rodrigue Sébastien

机构信息

Université de Sherbrooke , Département de Biologie, 2500 Boulevard Université, Sherbrooke, Québec J1K 2R1, Canada.

Université de Bordeaux , INRA, UMR 1332 de Biologie du Fruit et Pathologie, F-33140 Villenave d'Ornon, France.

出版信息

ACS Synth Biol. 2018 Jan 19;7(1):209-217. doi: 10.1021/acssynbio.7b00279. Epub 2017 Oct 3.

Abstract

Cloning and transplantation of bacterial genomes is a powerful method for the creation of engineered microorganisms. However, much remains to be understood about the molecular mechanisms and limitations of this approach. We report the whole-genome cloning of Mesoplasma florum in Saccharomyces cerevisiae, and use this model to investigate the impact of a bacterial chromosome in yeast cells. Our results indicate that the cloned M. florum genome is subjected to weak transcriptional activity, and causes no significant impact on yeast growth. We also report that the M. florum genome can be transplanted into Mycoplasma capricolum without any negative impact from the putative restriction enzyme encoding gene mfl307. Using whole-genome sequencing, we observed that a small number of mutations appeared in all M. florum transplants. Mutations also arose, albeit at a lower frequency, when the M. capricolum genome was transplanted into M. capricolum recipient cells. These observations suggest that genome transplantation is mutagenic, and that this phenomenon is magnified by the use of genome donor and recipient cell belonging to different species. No difference in efficiency was detected after three successive rounds of genome transplantation, suggesting that the observed mutations were not selected during the procedure. Taken together, our results provide a more accurate picture of the events taking place during bacterial genome cloning and transplantation.

摘要

细菌基因组的克隆与移植是创建工程微生物的一种强大方法。然而,对于这种方法的分子机制和局限性仍有许多有待了解之处。我们报道了嗜热栖热放线菌全基因组在酿酒酵母中的克隆,并利用该模型研究细菌染色体对酵母细胞的影响。我们的结果表明,克隆的嗜热栖热放线菌基因组转录活性较弱,且对酵母生长无显著影响。我们还报道,嗜热栖热放线菌基因组可移植到山羊支原体中,且假定的限制性内切酶编码基因mfl307没有产生任何负面影响。通过全基因组测序,我们观察到在所有嗜热栖热放线菌移植体中出现了少量突变。当山羊支原体基因组移植到山羊支原体受体细胞中时,也会出现突变,尽管频率较低。这些观察结果表明基因组移植具有致突变性,并且这种现象在使用属于不同物种的基因组供体和受体细胞时会被放大。在三轮连续的基因组移植后未检测到效率差异,这表明观察到的突变在该过程中未被选择。综上所述,我们的结果为细菌基因组克隆和移植过程中发生的事件提供了更准确的描述。

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